Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40232
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear ... 73 5e-13
L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protei... 73 5e-13
AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p pro... 73 5e-13
AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA ... 73 5e-13
X15702-1|CAA33732.1| 544|Drosophila melanogaster protein ( Frui... 29 7.3
AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p pro... 29 7.3
AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p pro... 29 7.3
AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p pro... 29 7.3
AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA... 29 7.3
AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA... 29 7.3
AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-P... 29 7.3
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA... 29 7.3
M12896-1|AAA28734.1| 381|Drosophila melanogaster protein ( D.me... 28 9.6
BT003450-1|AAO39453.1| 381|Drosophila melanogaster RH44056p pro... 28 9.6
AE014297-2590|AAF55601.1| 381|Drosophila melanogaster CG16740-P... 28 9.6
>M89775-1|AAA28441.1| 216|Drosophila melanogaster small nuclear
ribonucleoprotein protein.
Length = 216
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 213 KRLKKKN*RSHFMQIFTIWSNI-GYSSNENLKNAWPSICYFQGNFKCHCCFAEMQGFPFY 389
+++KK+ + IF+ + I + + LK + F+ MQGFPFY
Sbjct: 16 EKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFY 75
Query: 390 DKPMRIQYSKIDSDIIAKSKGTFQERPKRPKLP 488
DKPM+I YSK DSDI+AK KGTF+ERPK+ K P
Sbjct: 76 DKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPP 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 223 KRRIKEVTLCKFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDF 381
K +K+ FSQFGQILDIVA+KTLKMRGQAFVIFKEI SA+ ALR + F
Sbjct: 20 KEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGF 72
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 575 NVNAEQPPNQILFLTNLPDE 634
N EQPPNQILFLTNLP+E
Sbjct: 133 NAQTEQPPNQILFLTNLPEE 152
>L29521-1|AAA28903.1| 216|Drosophila melanogaster nuclear protein
protein.
Length = 216
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 213 KRLKKKN*RSHFMQIFTIWSNI-GYSSNENLKNAWPSICYFQGNFKCHCCFAEMQGFPFY 389
+++KK+ + IF+ + I + + LK + F+ MQGFPFY
Sbjct: 16 EKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFY 75
Query: 390 DKPMRIQYSKIDSDIIAKSKGTFQERPKRPKLP 488
DKPM+I YSK DSDI+AK KGTF+ERPK+ K P
Sbjct: 76 DKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPP 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 223 KRRIKEVTLCKFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDF 381
K +K+ FSQFGQILDIVA+KTLKMRGQAFVIFKEI SA+ ALR + F
Sbjct: 20 KEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGF 72
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 575 NVNAEQPPNQILFLTNLPDE 634
N EQPPNQILFLTNLP+E
Sbjct: 133 NAQTEQPPNQILFLTNLPEE 152
>AY061491-1|AAL29039.1| 216|Drosophila melanogaster LD45302p
protein.
Length = 216
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 213 KRLKKKN*RSHFMQIFTIWSNI-GYSSNENLKNAWPSICYFQGNFKCHCCFAEMQGFPFY 389
+++KK+ + IF+ + I + + LK + F+ MQGFPFY
Sbjct: 16 EKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFY 75
Query: 390 DKPMRIQYSKIDSDIIAKSKGTFQERPKRPKLP 488
DKPM+I YSK DSDI+AK KGTF+ERPK+ K P
Sbjct: 76 DKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPP 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 223 KRRIKEVTLCKFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDF 381
K +K+ FSQFGQILDIVA+KTLKMRGQAFVIFKEI SA+ ALR + F
Sbjct: 20 KEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGF 72
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 575 NVNAEQPPNQILFLTNLPDE 634
N EQPPNQILFLTNLP+E
Sbjct: 133 NAQTEQPPNQILFLTNLPEE 152
>AE014298-717|AAF46017.1| 216|Drosophila melanogaster CG4528-PA
protein.
Length = 216
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 213 KRLKKKN*RSHFMQIFTIWSNI-GYSSNENLKNAWPSICYFQGNFKCHCCFAEMQGFPFY 389
+++KK+ + IF+ + I + + LK + F+ MQGFPFY
Sbjct: 16 EKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGFPFY 75
Query: 390 DKPMRIQYSKIDSDIIAKSKGTFQERPKRPKLP 488
DKPM+I YSK DSDI+AK KGTF+ERPK+ K P
Sbjct: 76 DKPMQIAYSKSDSDIVAKIKGTFKERPKKVKPP 108
Score = 71.3 bits (167), Expect = 1e-12
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 223 KRRIKEVTLCKFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDF 381
K +K+ FSQFGQILDIVA+KTLKMRGQAFVIFKEI SA+ ALR + F
Sbjct: 20 KEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIGSASNALRTMQGF 72
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +2
Query: 575 NVNAEQPPNQILFLTNLPDE 634
N EQPPNQILFLTNLP+E
Sbjct: 133 NAQTEQPPNQILFLTNLPEE 152
>X15702-1|CAA33732.1| 544|Drosophila melanogaster protein (
Fruitfly LA9 mRNA forDNA binding protein. ).
Length = 544
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 509 KKKNKDPSRLIGHGIPGAGILNNVNAEQPPNQILFLTNLPDE 634
+K N + S GIP + + P NQI+F+TNLP+E
Sbjct: 146 EKANSEKSEE-NRGIPKVKV-GKIPLGTPKNQIVFVTNLPNE 185
>AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p
protein.
Length = 121
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 256 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDFH 384
F +FG I I T + RG AFV++++I A A F+
Sbjct: 35 FGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFN 77
>AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p protein.
Length = 1392
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 189 PFISIISMKRLKKKN*RSHFMQIFTIWSNIGYSSN-----ENLKNAWPSICYFQ 335
PF+ +++ K KN + Q T+ + SSN E+L AWP + Q
Sbjct: 882 PFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWPQLQVLQ 935
>AY058519-1|AAL13748.1| 542|Drosophila melanogaster LD22216p
protein.
Length = 542
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 509 KKKNKDPSRLIGHGIPGAGILNNVNAEQPPNQILFLTNLPDE 634
+K N + S GIP + + P NQI+F+TNLP+E
Sbjct: 146 EKANSEKSEE-NRGIPKVKV-GKIPLGTPKNQIVFVTNLPNE 185
>AE014297-4840|AAF57213.1| 542|Drosophila melanogaster CG2050-PA
protein.
Length = 542
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 509 KKKNKDPSRLIGHGIPGAGILNNVNAEQPPNQILFLTNLPDE 634
+K N + S GIP + + P NQI+F+TNLP+E
Sbjct: 146 EKANSEKSEE-NRGIPKVKV-GKIPLGTPKNQIVFVTNLPNE 185
>AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA
protein.
Length = 1392
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 189 PFISIISMKRLKKKN*RSHFMQIFTIWSNIGYSSN-----ENLKNAWPSICYFQ 335
PF+ +++ K KN + Q T+ + SSN E+L AWP + Q
Sbjct: 882 PFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWPQLQVLQ 935
>AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-PA
protein.
Length = 121
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 256 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRRCKDFH 384
F +FG I I T + RG AFV++++I A A F+
Sbjct: 35 FGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAKNACDHLSGFN 77
>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
protein.
Length = 2272
Score = 28.7 bits (61), Expect = 7.3
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 249 MQIFTIWSNIGYSSNE--NLKNAW-PSICYFQG-NFKCHCCFAEMQGFPFYDKPMRIQYS 416
+ + T+WSN+G S N+ NLK P +F G + C +A R +YS
Sbjct: 528 LMVETLWSNLGNSINDTNNLKKTHSPGSPFFLGVSLVKLCSYANTTKLDISVHTFRTEYS 587
Query: 417 KIDSDIIAKSKGTF-QERPKRPK 482
++ + KS Q R +PK
Sbjct: 588 MQLAEFVVKSMECLRQYRGIKPK 610
>M12896-1|AAA28734.1| 381|Drosophila melanogaster protein (
D.melanogaster opsingene Rh2, complete cds. ).
Length = 381
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 482 LWTFRSFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 369
+W RS+L F YY + F I S+WFII + H
Sbjct: 215 MWNPRSYLITYSLFVYYTPL-FLICYSYWFIIAAVAAH 251
>BT003450-1|AAO39453.1| 381|Drosophila melanogaster RH44056p
protein.
Length = 381
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 482 LWTFRSFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 369
+W RS+L F YY + F I S+WFII + H
Sbjct: 215 MWNPRSYLITYSLFVYYTPL-FLICYSYWFIIAAVAAH 251
>AE014297-2590|AAF55601.1| 381|Drosophila melanogaster CG16740-PA
protein.
Length = 381
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 482 LWTFRSFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 369
+W RS+L F YY + F I S+WFII + H
Sbjct: 215 MWNPRSYLITYSLFVYYTPL-FLICYSYWFIIAAVAAH 251
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,085,406
Number of Sequences: 53049
Number of extensions: 519142
Number of successful extensions: 1010
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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