Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40232
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 27 0.16
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 27 0.16
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 3.4
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 6.0
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 6.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.0
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 6.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.9
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 27.1 bits (57), Expect = 0.16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 467 SFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 369
S+L C + Y++ + F I+ S+WFII+ + H
Sbjct: 215 SYLVCYGIWVYFVPL-FLIIYSYWFIIQAVAAH 246
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 27.1 bits (57), Expect = 0.16
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 467 SFLKCSFTFCYYITINF*ILNSHWFIIEWKSLH 369
S+L C + Y++ + F I+ S+WFII+ + H
Sbjct: 91 SYLVCYGIWVYFVPL-FLIIYSYWFIIQAVAAH 122
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 560 AGILNNVNAEQPPNQILFLTNLPDELQR 643
+G++NNV + PP ++F N L++
Sbjct: 138 SGLINNVRSVCPPQLLVFDLNTSQLLKQ 165
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 608 EFGWEVVPH 582
E GW+V+PH
Sbjct: 139 ELGWDVLPH 147
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 608 EFGWEVVPH 582
E GW+V+PH
Sbjct: 140 ELGWDVLPH 148
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.0
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 538 YWAWYPWCW 564
+W YPW W
Sbjct: 94 FWQQYPWQW 102
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 608 EFGWEVVPH 582
E GW+V+PH
Sbjct: 261 ELGWDVLPH 269
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 124 SRLKNKT*FCNQNDNGYKTQPYHL 195
S L N + N N+N YK Y++
Sbjct: 83 SSLSNNYNYSNYNNNNYKQLCYNI 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,278
Number of Sequences: 438
Number of extensions: 3600
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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