Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40230
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    26   0.26 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    26   0.26 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.9  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 134 CVSQNTGTCPESSCACPEISCACPETSCACPE 229
           C + N G C       P I+   P  SCACP+
Sbjct: 36  CQAVN-GHCSHLCLPAPRINSKSPLLSCACPD 66



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/30 (26%), Positives = 11/30 (36%)
 Frame = +2

Query: 158 CPESSCACPEISCACPETSCACPESSCLCP 247
           C   +  C  +    P  +   P  SC CP
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACP 65


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 134 CVSQNTGTCPESSCACPEISCACPETSCACPE 229
           C + N G C       P I+   P  SCACP+
Sbjct: 36  CQAVN-GHCSHLCLPAPRINSKSPLLSCACPD 66



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/30 (26%), Positives = 11/30 (36%)
 Frame = +2

Query: 158 CPESSCACPEISCACPETSCACPESSCLCP 247
           C   +  C  +    P  +   P  SC CP
Sbjct: 36  CQAVNGHCSHLCLPAPRINSKSPLLSCACP 65


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 630 LKCFSNRFHYFFSSLNPSLFGLRCN 556
           L   S  F+Y  +++NP L+ +  N
Sbjct: 329 LTYMSGVFYYLSTTVNPLLYNIMSN 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,581
Number of Sequences: 438
Number of extensions: 801
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)