Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40229
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 184 5e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 184 5e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 184 5e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 184 5e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 184 5e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 180 8e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 122 2e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 118 5e-27
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 6e-14
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 66 2e-11
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 66 2e-11
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 66 2e-11
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 60 1e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 41 7e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 32 0.42
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 31 0.98
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 30 1.3
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 30 1.7
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 30 1.7
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 29 3.9
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.9
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 5.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 5.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 5.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.2
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 5.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 28 6.9
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 6.9
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 27 9.1
AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 177 bits (430), Expect = 8e-45
Identities = 88/98 (89%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 177 bits (430), Expect = 8e-45
Identities = 88/98 (89%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGI 275
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 14 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 73
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVL 97
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 99 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 158
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 159 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 193
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 183 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 231
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 44 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 103
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVL 127
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 129 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 188
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 189 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 223
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 213 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 261
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 184 bits (448), Expect = 5e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVL 141
Score = 176 bits (429), Expect = 1e-44
Identities = 87/98 (88%), Positives = 91/98 (92%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 143 LYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVALDFEQ+ + AA S SL
Sbjct: 203 TTAEREIVRDIKEKLCYVALDFEQE---MATAASSSSL 237
Score = 99 bits (238), Expect = 1e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
EMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GI
Sbjct: 227 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGI 275
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 180 bits (438), Expect = 8e-46
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 182
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNR 116
Query: 183 EKMTQIMFETFNTPAMYVAIQAVL 254
EKMTQIMFETFNTPAMYV IQAVL
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVL 140
Score = 167 bits (406), Expect = 6e-42
Identities = 83/98 (84%), Positives = 88/98 (89%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FT
Sbjct: 142 LYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFT 201
Query: 437 TTAEREIVRDIKEKLCYVALDFEQKWPPLHPAAPSRSL 550
TTAEREIVRDIKEKLCYVA DFE + L AA S SL
Sbjct: 202 TTAEREIVRDIKEKLCYVAHDFESE---LAAAASSSSL 236
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +1
Query: 505 AEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
+E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GI
Sbjct: 225 SELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGI 274
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 122 bits (295), Expect = 2e-28
Identities = 51/85 (60%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 179
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 180 REKMTQIMFETFNTPAMYVAIQAVL 254
RE+ +I FETFN PA+Y+ +QAVL
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAVL 144
Score = 114 bits (275), Expect = 5e-26
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 146 LYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205
Query: 437 TTAEREIVRDIKEKLCYVALD 499
+ E EIVR++KE CY+ALD
Sbjct: 206 RSNEFEIVREMKENACYLALD 226
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 517 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
T ++S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGM 273
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 118 bits (283), Expect = 5e-27
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +2
Query: 257 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 436
LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 146 LYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFN 205
Query: 437 TTAEREIVRDIKEKLCYVALDFEQK 511
+A+ E VR +KEKLCY+A D EQ+
Sbjct: 206 HSADFETVRQMKEKLCYIAYDVEQE 230
Score = 98.3 bits (234), Expect = 4e-21
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKAN 179
E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +N
Sbjct: 60 ECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSN 119
Query: 180 REKMTQIMFETFNTPAMYVAIQAVL 254
REKM Q+MFE + ++YVA+QAVL
Sbjct: 120 REKMFQVMFEQYGFNSIYVAVQAVL 144
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 508 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGI 654
E A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+
Sbjct: 230 EERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGL 278
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/78 (55%), Positives = 53/78 (67%)
Frame = +3
Query: 30 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 209
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 210 TFNTPAMYVAIQAVLRCT 263
+FN P +Y+A+QAVL T
Sbjct: 140 SFNVPGLYIAVQAVLALT 157
Score = 74.9 bits (176), Expect = 5e-14
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = +2
Query: 278 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 457
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEV 230
Query: 458 VRDIKEKLCYVALD 499
+ IKEK CYV D
Sbjct: 231 AKMIKEKFCYVCPD 244
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +3
Query: 45 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 224
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 225 AMYVAIQAVLRC 260
A Y++ VL C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/54 (35%), Positives = 38/54 (70%)
Frame = +2
Query: 260 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 421
+A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 166 FAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 550 YELPDGQVITIGNERFRCPEALFQPSFLGME 642
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 89
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 89
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 89
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 EAQSKRGILTLKYPIEHGIVTNWDDM 80
EAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +2
Query: 230 VRRHPSRAPLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 409
+ R PS LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L
Sbjct: 307 ITRQPSLI-LYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRAS 364
Query: 410 LTERG---YSFTTTAEREIVRDIKEKLCYVALDFEQK 511
L+ Y+F + E+ I+R E+ YV D++++
Sbjct: 365 LSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKE 401
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 580 IGNERFRCPEALFQPSFLGMEACGI 654
I N RF C E LF+P G++ G+
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGL 452
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/75 (25%), Positives = 41/75 (54%)
Frame = +2
Query: 284 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 463
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 464 DIKEKLCYVALDFEQ 508
+ KE LC+V+ +F++
Sbjct: 204 ECKEDLCFVSQNFDE 218
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 42 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 215
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 574 ITIGNERFRCPEALFQPSFLGMEACGI 654
I +G ERF PE LF PS + ++ CG+
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGV 289
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/75 (25%), Positives = 41/75 (54%)
Frame = +2
Query: 284 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 463
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 464 DIKEKLCYVALDFEQ 508
+ KE LC+V+ +F++
Sbjct: 204 ECKEDLCFVSQNFDE 218
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 42 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 215
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 574 ITIGNERFRCPEALFQPSFLGMEACGI 654
I +G ERF PE LF PS + ++ CG+
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGV 289
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +3
Query: 126 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPAT 305
P P + +P P T + T +T A + T P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 306 VSPTPCPSTKDT 341
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +3
Query: 126 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPAT 305
P P + +P P T + T +T A + T P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 306 VSPTPCPSTKDT 341
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 180 REKMTQIMFETFN------TPAMYVAIQAVLRCTRPVVPPVSCWTPATVS 311
R++ Q+ F+T + TP + VA+ + C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 180 REKMTQIMFETFN------TPAMYVAIQAVLRCTRPVVPPVSCWTPATVS 311
R++ Q+ F+T + TP + VA+ + C + P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/82 (32%), Positives = 35/82 (42%)
Frame = +1
Query: 286 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS* 465
R G R R+ RR RTPPR + R R R R+R V RR RS
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRR---RSE 137
Query: 466 HQGEAVLRRS*LRAEMATAASS 531
+ + R LRA ++ + SS
Sbjct: 138 SRSPSPKRDLQLRANISVSYSS 159
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 267 PVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 362
P VPP T P TVS P PS PT SC
Sbjct: 370 PTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/92 (28%), Positives = 33/92 (35%)
Frame = +1
Query: 286 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS* 465
R G R R+ RR RTPPR + R R R R+R V RR
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRS 140
Query: 466 HQGEAVLRRS*LRAEMATAASSSSLEKSYELP 561
+ L+R R+ A S +S P
Sbjct: 141 PSPKRDLKREASRSRSPLPAKDRSRTRSGSPP 172
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 210 TFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDT 341
T +T A + T P VPPV+ TP T + T +T T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Frame = +3
Query: 132 EHPVLL--TEAPLNPKANREKMTQIMFE-TFNTPAMY-------VAIQAVLRCTRPVVPP 281
+HP+LL T+ P+ N + + F+ T+++ M V I L+ +RP +
Sbjct: 724 QHPMLLFSTQQPMTCTPNSQNSCPLGFQCTYSSIRMLYFCCRDIVRIDKCLQGSRPEIWQ 783
Query: 282 VSCWTPATVSPTPCPSTKDTHSPTP 356
+ A CPST ++PTP
Sbjct: 784 STAEPRACSRDAQCPSTTSCYAPTP 808
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 292 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRAR 423
G+ RR R R+PPR + SR+R R P R R
Sbjct: 394 GMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRR 437
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 179 QREDDPDHVRNIQHARHVRRHPSRAPLYASG 271
Q D++R++ H+R +P R PLY SG
Sbjct: 242 QHNISADYIRDLLHSRIYPDNPRRDPLYRSG 272
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 267 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 356
P++PP PA V T P+T++T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = +3
Query: 171 KANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 350
K+ +E T I F T TP + +VP S T T + TP P T T P
Sbjct: 428 KSTKEPKTTI-FTT--TPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 351 TPSCVWT 371
T + T
Sbjct: 485 TTTTYTT 491
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +1
Query: 286 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRR 447
R G R R+ RR RTPPR + R R R R+R V RR
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRR 134
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 116 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 241
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 116 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 241
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 116 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 241
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 116 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 241
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 261 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 359
T PP S TP + T P T T SP+ S
Sbjct: 221 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 261 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 359
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +3
Query: 126 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPAT 305
P E P ++ P +P + + Q+ T P A A T P+ P + P T
Sbjct: 1499 PAEIPRVVV--PQSPGTPQPVVPQVSIVTPQAPQPTAA--ATSASTGPIAPEPTTAAPTT 1554
Query: 306 VSPTPCPSTKDTHSP 350
TP P + H P
Sbjct: 1555 TETTPLPPSLAPHPP 1569
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 609 LWATESFVSDSDDLTVGKFVRLLEGAAGCSGG 514
L++T SFVS + T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 267 PVVPPVSCWTPATVSPTPCPSTKDTHSP 350
P +PP + T T + PCP T++P
Sbjct: 134 PCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +3
Query: 150 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLRCTRPVVPPVSCWTPATVS--PTPC 323
T P T ET TP T P + TP T + PT
Sbjct: 119 TPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Query: 324 PSTKDTHSPTPSCVWT*P 377
+T T + TP+ T P
Sbjct: 179 TTTPTTTTTTPTTTTTAP 196
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 518 PLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSN 622
P PAA RSL P R SL T +V+ R +N
Sbjct: 27 PASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNN 61
>AF077537-8|AAC26277.1| 226|Caenorhabditis elegans Hypothetical
protein F16G10.9 protein.
Length = 226
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 216 NTPAMYVAIQAVL---RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 371
N +++ IQ ++ C +VPP + P+T++P + TP ++T
Sbjct: 19 NFLTLFLTIQCLMVGTECCMRMVPPDDVYIPSTLAPVESTMAPGVSTMTPGGIYT 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,079
Number of Sequences: 27780
Number of extensions: 392069
Number of successful extensions: 1940
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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