Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40228
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 66 3e-11
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 50 2e-06
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 49 2e-06
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 49 3e-06
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 48 6e-06
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 48 6e-06
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 47 1e-05
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 45 4e-05
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 45 5e-05
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 45 5e-05
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 44 7e-05
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 40 0.002
09_04_0714 - 19685374-19685430,19685606-19685669,19686117-196862... 32 0.30
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 31 0.93
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 29 2.1
11_05_0089 + 18975637-18977439 29 2.8
06_01_0684 + 5008881-5009504 29 2.8
02_02_0590 - 11894721-11895188,11895684-11895851 29 2.8
03_06_0368 - 33418918-33419031,33419132-33419530,33419680-334198... 29 3.7
05_04_0280 - 19752112-19752451,19754104-19755587 28 5.0
03_01_0015 + 126611-126639,126718-127099 28 5.0
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 28 5.0
10_07_0151 + 13430925-13431240,13431858-13432015,13432996-134330... 28 6.5
06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645,754... 28 6.5
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 27 8.7
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 27 8.7
02_02_0730 - 13466806-13466865,13466922-13467029,13467897-134679... 27 8.7
01_07_0134 + 41339108-41339177,41339608-41340530 27 8.7
01_01_0096 + 737928-739894,740164-740221 27 8.7
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQ-GNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
EPT REW HWLV NI G + + G+ + Y+G PP G+HRYV +L++Q +++ P
Sbjct: 77 EPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRPP--VGIHRYVMVLFQQKARVAAPPP 134
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
RA F FA +++LG+ + A
Sbjct: 135 ----DEDAARARFSTRAFADRHDLGLPVAA 160
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPR 439
PT RE+ HW+V +I + +S G + Y P G+HR V +LY+Q + T P+
Sbjct: 77 PTLREYLHWMVTDIPSSTDDSFGREIVTY--ESPSPTMGIHRIVMVLYQQLGRGTVFAPQ 134
Query: 440 LTNTSSDKRANFKIAEFAKKYNLG 511
+ R NF + FA+++NLG
Sbjct: 135 V-------RQNFNLRSFARRFNLG 151
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 219 YTLAMTDPDAPSVKNP 266
YTL M DPDAP+ NP
Sbjct: 62 YTLVMVDPDAPNPSNP 77
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQGNEVNS-GETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
+P RE+ HWLV +I G S G+ + Y P G+HR VF+L++Q + T P
Sbjct: 81 DPNLREYLHWLVTDIPGTTAASFGQEVMCY--ESPRPTMGIHRLVFVLFQQLGRQTVYAP 138
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLG 511
R NF +FA+ YNLG
Sbjct: 139 -------GWRQNFNTKDFAELYNLG 156
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
+YTL M DPDAPS +P+ WL T
Sbjct: 66 FYTLVMVDPDAPSPSDPNLRE-YLHWLVT 93
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPR 439
PT RE+ HW+V +I + + G + Y P G+HR+VF+L++Q R
Sbjct: 77 PTKREYLHWMVTDIPETTDARFGNEIVPY--ESPRPTAGIHRFVFILFRQ-------SVR 127
Query: 440 LTNTSSDKRANFKIAEFAKKYNLG 511
T + R NF +FA+ YNLG
Sbjct: 128 QTTYAPGWRQNFNTRDFAELYNLG 151
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 198 GRGPGQYYTLAMTDPDAPSVKNP 266
GR YTL M DPDAPS NP
Sbjct: 55 GRDMRTLYTLVMVDPDAPSPSNP 77
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 263 PTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPR 439
PT RE+ HW+V +I + + G + Y P TG+HR V +L++Q + T P
Sbjct: 79 PTLREYLHWMVTDIPASTDATYGREVVCYESPNPT--TGIHRMVLVLFRQLGRETVYAPA 136
Query: 440 LTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
+ R NF FA++YNLG + A
Sbjct: 137 V-------RHNFTTRAFARRYNLGAPVAA 158
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 219 YTLAMTDPDAPSVKNP 266
YTL M DPDAP+ NP
Sbjct: 64 YTLVMVDPDAPNPSNP 79
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQGNE-VNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
+P RE+ HWLV +I V+ G + Y P G+HR VFLL++Q + T P
Sbjct: 80 DPNLREYLHWLVTDIPATTGVSFGTEVVCY--ESPRPVLGIHRLVFLLFEQLGRQTVYAP 137
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
R NF +FA+ YNLG+ + A
Sbjct: 138 -------GWRQNFSTRDFAELYNLGLPVAA 160
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
+YTL M DPDAPS +P+ WL T
Sbjct: 65 FYTLVMVDPDAPSPSDPNLRE-YLHWLVT 92
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 263 PTFREWHHWLVGNIQGNEVNSGETLSQYV--GSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
P RE+ HWLV +I G +G T Q V P G+HR VF+L++Q + T P
Sbjct: 81 PNLREYLHWLVTDIPG---TTGATFGQEVMCYESPRPTMGIHRLVFVLFQQLGRQTVYAP 137
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLG 511
R NF FA+ YNLG
Sbjct: 138 -------GWRQNFSTRNFAELYNLG 155
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
+YTL M DPDAPS NP+ WL T
Sbjct: 65 FYTLVMVDPDAPSPSNPNLRE-YLHWLVT 92
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 263 PTFREWHHWLVGNIQG-NEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPR 439
PT RE+ HWLV +I G + N G + Y P G+HR +L++Q ++ D+P
Sbjct: 66 PTLREYLHWLVTDIPGTTDANYGREVVCY--ESPRPAAGIHRVAVVLFRQMARGGVDQPP 123
Query: 440 LTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
L R NF FA + LG + A
Sbjct: 124 LL------RHNFSTRGFADDHALGAPVAA 146
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 46 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTLVKDEPSVKWDADQDS 216
A S +V+ DV+ +P L+V Y +GV V G +L P+ V PSV+ D D+
Sbjct: 4 ANSLVLGRVIGDVVDLFSPEVTLRVMY-NGVRVVNGEDLRPSAVSARPSVEVMVDPDA 60
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PTFREWHHWLVGNI-QGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPR 439
P+ RE+ HWLV ++ +G + + G + Y P G+HR VF++++Q + + P
Sbjct: 80 PSKREYLHWLVTDVPEGGDTSKGTEVVAY--ESPRPTAGIHRLVFIVFRQTVRQSIYAP- 136
Query: 440 LTNTSSDKRANFKIAEFAKKYNLG 511
R+NF +FA Y+LG
Sbjct: 137 ------GWRSNFNTRDFAACYSLG 154
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 198 GRGPGQYYTLAMTDPDAPSVKNP 266
GR YTL M DPDAPS NP
Sbjct: 58 GRDGRALYTLVMVDPDAPSPSNP 80
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 34 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTLVKDEPSVKWDADQD 213
MS +V DV+ A+ L + + E+ G+EL P+ V EP+V+ +D
Sbjct: 1 MSMSRDPLVVGSIVGDVVDHFGASALLRLFYNHREMTSGSELRPSQVAGEPAVQITGGRD 60
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
+P RE HW+V +I G + + G + Y P G+HR++F+L+KQ + T P
Sbjct: 79 DPYLREHLHWIVTDIPGTTDASFGREVISY--ESPKPNIGIHRFIFVLFKQKRRQTVIVP 136
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
R +F FA++ +LG+ + A
Sbjct: 137 SF-------RDHFNTRRFAEENDLGLPVAA 159
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
++TL MTDPD P +P+ W+ T
Sbjct: 64 FFTLVMTDPDVPGPSDPYLRE-HLHWIVT 91
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
+P RE HW+V +I G + + G + Y P G+HR+VF+L+KQ + P
Sbjct: 79 DPYLREHLHWIVTDIPGTTDASFGREIISY--ESPKPSIGIHRFVFVLFKQKRRQAVVVP 136
Query: 437 RLTNTSSDKRANFKIAEFAKKYNLGIRLRA 526
R +F +FA++ LG+ + A
Sbjct: 137 -------SSRDHFNTRQFAEENELGLPVAA 159
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
++TL MTDPD P +P+ W+ T
Sbjct: 64 FFTLVMTDPDVPGPSDPYLRE-HLHWIVT 91
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 260 EPTFREWHHWLVGNIQGN-EVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEP 436
+P RE HW+V +I G + + G + Y P G+HR+V +L+KQ + P
Sbjct: 79 DPYLREHLHWIVTDIPGTTDASFGREVVSY--ESPKPNIGIHRFVLVLFKQKRRQAVTPP 136
Query: 437 RLTNTSSDKR 466
+ S +R
Sbjct: 137 SSRDYFSTRR 146
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
++TL MTDPD P +P+ W+ T
Sbjct: 64 FFTLVMTDPDVPGPSDPYLRE-HLHWIVT 91
>09_04_0714 -
19685374-19685430,19685606-19685669,19686117-19686256,
19687916-19687969,19688407-19688451,19689480-19689517,
19689713-19689831,19689955-19690016,19691038-19691157
Length = 232
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 198 GRGPGQYYTLAMTDPDAPSVKNPHF 272
GR + YTL M DPDAPS P +
Sbjct: 31 GRDQTKLYTLVMVDPDAPSPSKPEY 55
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNP 266
+YTL + DPDAPS NP
Sbjct: 65 FYTLVLVDPDAPSPSNP 81
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 296 GNIQGNEVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANF 475
G + + V S + +G PP +H + + P + +P+ ++ SS+K +NF
Sbjct: 440 GRTETSRVGSQNMPTNSLGQSPPYSPHIHSDEYDMPTDPHRSHSPDPQYSDDSSEKESNF 499
>11_05_0089 + 18975637-18977439
Length = 600
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 219 YTLAMTDPDAPSVKNPHFANGTTGW 293
+T+++ +PDAP V + FA + GW
Sbjct: 58 HTVSLVEPDAPVVDHDEFAGYSPGW 82
>06_01_0684 + 5008881-5009504
Length = 207
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 407 VCTRGTRICAGLSFPEVQSPRTGTK 333
+C RG + AGL+FPE P T +
Sbjct: 74 ICLRGVQAIAGLNFPESPPPPTAAR 98
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 115 VKYPSGVEVKEGNELTPTLVKDEP 186
++ P ++V+ GN+LTPT V ++P
Sbjct: 71 IQSPINLQVEHGNDLTPTSVSEKP 94
>03_06_0368 -
33418918-33419031,33419132-33419530,33419680-33419805,
33419880-33420096,33420178-33420272,33420840-33421060,
33421149-33421222,33421362-33421484,33421814-33421854,
33421933-33422134,33422245-33422504,33422669-33422798,
33423037-33423317
Length = 760
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 239 VGHGQSVVLSWSASHFTEGSSFTRVGV 159
+G S+V SW A +FTEG +T++ V
Sbjct: 451 LGSVPSLVKSWKAGNFTEGLHWTKIRV 477
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 323 SLPRCPGCCQPASGAIREMWVLYGRRIRVGHGQSVVLSWSAS 198
+L R P C P + + + L+GR + V H ++ +LS AS
Sbjct: 199 TLERDPRCGPPNADSYNILIALFGRSLLVDHMEATLLSLDAS 240
>03_01_0015 + 126611-126639,126718-127099
Length = 136
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 400 QEEHVSVQACLFRRSRAHVLGQSFAGVYLVALDVANQPVVPFAK 269
Q++ VS C++R AH G+ V DVA+ P +P K
Sbjct: 55 QQQEVSESKCVYRNEVAHAAGERTQ----VLQDVASDPTLPRTK 94
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 216 YYTLAMTDPDAPSVKNPHFANGTTGWLAT 302
++TL MTDPD P +P+ W+ T
Sbjct: 64 FFTLVMTDPDVPGPSDPYLRE-HLHWIVT 91
>10_07_0151 +
13430925-13431240,13431858-13432015,13432996-13433042,
13433818-13433881,13434795-13435243,13435618-13435848,
13436181-13436226
Length = 436
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 407 QPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGIRLRATSTKRSMTTTSLFCTSS 577
+P + P LT T + N K+A A +NLG ++ + M L C S+
Sbjct: 135 EPKGMIDTLPLLTQTFGRRAGNMKMANLADYFNLGPQIHRSLYDVRMNLDVLKCCST 191
>06_01_0974 +
7541771-7542553,7542666-7542795,7543098-7543645,
7544482-7544864,7546670-7546766
Length = 646
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 288 QWCHSRNVGSLRTAHQGRSW 229
+WCH + + RTA GR W
Sbjct: 616 RWCHGDHPRAARTASSGRQW 635
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 219 YTLAMTDPDAPSVKNP 266
YTL + DPDAPS +P
Sbjct: 60 YTLVLVDPDAPSPSDP 75
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 265 HISRMAPL--AGWQHPGQRGKLRRNFVPVRGLWTS--GKDRPAQIRVPLVQTTI 414
H++ PL AGW G+R + RR+ G S G D ++++ L QTTI
Sbjct: 13 HLAGQPPLLTAGWG--GRRERARRSHAMPTGRRRSLQGNDGTPKVKISLTQTTI 64
>02_02_0730 -
13466806-13466865,13466922-13467029,13467897-13467910,
13468234-13468389,13468474-13468599,13468660-13468842,
13469103-13469198,13469290-13469338
Length = 263
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 559 GRSRHTALRRSCPQSDP*VVLLGE--LGNFEIGTFVARSVSESRLVE 425
G S T+LRRSCP +D G+ IG F S+++S+L E
Sbjct: 6 GGSTPTSLRRSCPFADINNASAGDSPKKRNNIGVFTPTSLTKSKLQE 52
>01_07_0134 + 41339108-41339177,41339608-41340530
Length = 330
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 GNEVNSGETLSQYVGSGPPEKTG-LHRYVFLLYKQPSK 418
GN + L +VG G P++ G + Y+F ++ + K
Sbjct: 269 GNAQTYNQNLINHVGQGTPKRPGSIETYIFAMFNENQK 306
>01_01_0096 + 737928-739894,740164-740221
Length = 674
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 KNPHFANGTTGWLATSRATR*TP-AKLCPSTWALDLRKRQACTDTCSSCTN 407
++ + GTTG T P ++CP ++ L + T TC S TN
Sbjct: 190 QDKYCCTGTTGTKTCEPTTFSLPFVRMCPDAYSYSLDDSSSTTFTCPSGTN 240
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,228,419
Number of Sequences: 37544
Number of extensions: 420015
Number of successful extensions: 1249
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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