Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40227
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IRE6 Cluster: CG14955-PB, isoform B; n=3; Drosophila ...    36   0.97 
UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_A4J8Z2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI0000D8A092 Cluster: hypothetical protein eimer3363b0...    33   9.0  
UniRef50_Q662G6 Cluster: Putative uncharacterized protein; n=4; ...    33   9.0  
UniRef50_Q7YN71 Cluster: Ribosomal protein S5; n=1; Eimeria tene...    33   9.0  
UniRef50_Q4QQD8 Cluster: Polyprotein; n=1; Schistosoma mansoni|R...    33   9.0  
UniRef50_Q5APE6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  
UniRef50_Q5DUY0 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    33   9.0  

>UniRef50_Q8IRE6 Cluster: CG14955-PB, isoform B; n=3; Drosophila
           melanogaster|Rep: CG14955-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 1035

 Score = 35.9 bits (79), Expect = 0.97
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 213 LISPLIIMFPILLVFKLTHWCCCIVWNKN 299
           L+  L+++F ++L+  L + CCC+ W KN
Sbjct: 56  LVLLLVLLFLLILILGLLYACCCVAWEKN 84


>UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2461

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 22/75 (29%), Positives = 39/75 (52%)
 Frame = +3

Query: 123  LIDILNLEFLIDLIMETPKNLIIYTLITRSLISPLIIMFPILLVFKLTHWCCCIVWNKNF 302
            L+  +N +F IDL++   KN II   + +   + LI      L+FK+++   C+ W + F
Sbjct: 1663 LLIYMNEKFCIDLLIYLQKNYIINKCMRKKRKTLLI------LLFKISYVFICLKWKEAF 1716

Query: 303  GTVKNIYDPSNKRII 347
              + NI+   N  I+
Sbjct: 1717 CLLLNIFKNENDEIL 1731


>UniRef50_A4J8Z2 Cluster: Putative uncharacterized protein; n=1;
           Desulfotomaculum reducens MI-1|Rep: Putative
           uncharacterized protein - Desulfotomaculum reducens MI-1
          Length = 349

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -1

Query: 605 SILFF--YKDSLQKYIYTIKY*KALYKWKIEYILAIFITFYWYLMF 474
           + LFF  YK S+  Y+Y +K  K L+   I YIL   + +Y Y++F
Sbjct: 77  AFLFFKTYKQSVNYYVYKLK--KRLFSLLIPYILYNILGYYKYILF 120


>UniRef50_UPI0000D8A092 Cluster: hypothetical protein
           eimer3363b01.tmp1; n=1; Eimeria tenella|Rep:
           hypothetical protein eimer3363b01.tmp1 - Eimeria tenella
          Length = 299

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = +3

Query: 93  CLRSSLLGASLIDILNLEFLIDLIMETPKNLIIYTLITRSLISPLIIMFPILLVFKLTHW 272
           CL   L G  L+ +L L  ++ L++     L++  L+   ++S L+ M  ILL+  L   
Sbjct: 200 CLHPLLSGLLLLLLLLLLLVVLLLLPLLLALLLLFLLLLVMMSLLLQMILILLLLLLCCC 259

Query: 273 CCC 281
           CCC
Sbjct: 260 CCC 262


>UniRef50_Q662G6 Cluster: Putative uncharacterized protein; n=4;
           cellular organisms|Rep: Putative uncharacterized protein
           - Borrelia garinii
          Length = 754

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 22/87 (25%), Positives = 44/87 (50%)
 Frame = +3

Query: 3   FFYLIFIFRNNQFDTINVLIYVRYYDSWYLCLRSSLLGASLIDILNLEFLIDLIMETPKN 182
           FF ++ I       T N  IY+ Y    YL + +S++   ++  + +EF++ +I+++   
Sbjct: 387 FFTILIIHNLLSLFTYNFTIYLNYRQLKYLAISTSIIELIILMFIKIEFILIVIIKSILL 446

Query: 183 LIIYTLITRSLISPLIIMFPILLVFKL 263
           LI    IT   I  +I++   ++ F L
Sbjct: 447 LIKPNKIT--TIQKIIVIIIWIINFIL 471


>UniRef50_Q7YN71 Cluster: Ribosomal protein S5; n=1; Eimeria
           tenella|Rep: Ribosomal protein S5 - Eimeria tenella
          Length = 231

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 656 LSNVICHVRKCSIKSQMSILFFYKDSLQKYIYTIKY*KALYKWKIEYILAIFITFYWYLM 477
           L + I   R  + K+   I  FY + L+  IY  K  K LY +   Y + I  ++   L+
Sbjct: 157 LQDAISKARLHAFKNIYQISLFYSNLLKNNIYIKKKFKKLYLFSYNYKIKISSSYIIRLL 216

Query: 476 FYY 468
           FY+
Sbjct: 217 FYF 219


>UniRef50_Q4QQD8 Cluster: Polyprotein; n=1; Schistosoma mansoni|Rep:
           Polyprotein - Schistosoma mansoni (Blood fluke)
          Length = 1144

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +1

Query: 343 SSADVYCYL--KFNQKYLCPVLHMALIIIDTTELKCS 447
           S+AD + YL  KFN K  CPV H+ L+    TE+ C+
Sbjct: 738 SAADTFDYLGIKFNFKGRCPVAHIDLLNNYLTEISCA 774


>UniRef50_Q5APE6 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 118

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 602 ILFFYKDSLQKYIYTIKY*KALYKWKIEYILAIFITFYWYLMFY 471
           ++ FY D LQ++IY   +   L K    Y   +F+ FY  L FY
Sbjct: 1   MIAFYFDDLQRWIYIHHHDVYLMKLFQSYFCIVFVLFYESLFFY 44


>UniRef50_Q5DUY0 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=3; Nyctotherus ovalis|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Nyctotherus ovalis
          Length = 1849

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
 Frame = +3

Query: 12  LIFIFRNNQFDTINVLIYVRYYDS------WYLCLRSSLLGASLIDILNLEFLIDLIMET 173
           L+++ + N     N++ Y++Y  S      +   L   LL  S +D L +E L+D +   
Sbjct: 100 LLYLIQLNYILLTNIVGYLQYSCSEIANLVYTYILLEGLLDVSELDALVVETLLDYLW-V 158

Query: 174 PKNLIIYTLITRSLISPLIIMFPILLVFKLTHWCCCIVWNKNFG 305
           P +LII           +     I  V +  +W C ++WN N G
Sbjct: 159 PCDLIIRYYRAYWYFEGVYFNLNIPYVQRSAYWLCVVIWN-NIG 201


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,166,762
Number of Sequences: 1657284
Number of extensions: 11621337
Number of successful extensions: 28082
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28005
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)