Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40227
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.79 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.79 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 677 SLFLCQTLSNVICHVRKCSIKSQMSILFF 591
           ++++CQT+SN     RK  +  Q+  L+F
Sbjct: 196 NIYVCQTVSNFEYFQRKILLMIQLYYLYF 224


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 677 SLFLCQTLSNVICHVRKCSIKSQMSILFF 591
           ++++CQT+SN     RK  +  Q+  L+F
Sbjct: 122 NIYVCQTVSNFEYFQRKILLMIQLYYLYF 150


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 635  VRKCSIKSQMSI-LFFYKDSLQKYIYTI 555
            VRK  ++   S  + F+KD L KY+Y I
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPI 1247


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 635  VRKCSIKSQMSI-LFFYKDSLQKYIYTI 555
            VRK  ++   S  + F+KD L KY+Y I
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPI 1247


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 635  VRKCSIKSQMSI-LFFYKDSLQKYIYTI 555
            VRK  ++   S  + F+KD L KY+Y I
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPI 1247


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 635  VRKCSIKSQMSI-LFFYKDSLQKYIYTI 555
            VRK  ++   S  + F+KD L KY+Y I
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPI 1247


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 455 SAEEHFNSVVSIIINAMCKTGHKYF*LNFK*Q*TSADDPF 336
           S  E    V+  ++    KTGH YF +N   Q  SA DP+
Sbjct: 110 STHEELLEVLKKVVTYSVKTGHPYF-VN---QLFSAVDPY 145


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 580 RCKNIFILLNIKKLYINGRLSTYWLYL 500
           R   + IL NI    +     +YWLYL
Sbjct: 37  RSSKLLILYNIILQVLFVSFVSYWLYL 63


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 580 RCKNIFILLNIKKLYINGRLSTYWLYL 500
           R   + IL NI    +     +YWLYL
Sbjct: 55  RSSKLLILYNIILQVLFVSFVSYWLYL 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,727
Number of Sequences: 336
Number of extensions: 3684
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)