Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40227
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U73395-1|AAC51147.1|  341|Homo sapiens NK-receptor protein.            30   9.3  

>U73395-1|AAC51147.1|  341|Homo sapiens NK-receptor protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 168 ETPKNLIIYTLITRSLISPLIIMFPILLVFKLTHWCC 278
           ET   + ++ LI  S++   II+F +LL F L  WCC
Sbjct: 237 ETGNPIHLHVLIGTSVV---IILFILLLFFLLHRWCC 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,741,075
Number of Sequences: 237096
Number of extensions: 1659851
Number of successful extensions: 6537
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6537
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)