Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40227
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB...    36   0.054
AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA...    36   0.054
AF145607-1|AAD38582.1|  345|Drosophila melanogaster BcDNA.GH0271...    29   4.7  
AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA...    29   4.7  

>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
           isoform B protein.
          Length = 1035

 Score = 35.9 bits (79), Expect = 0.054
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 213 LISPLIIMFPILLVFKLTHWCCCIVWNKN 299
           L+  L+++F ++L+  L + CCC+ W KN
Sbjct: 56  LVLLLVLLFLLILILGLLYACCCVAWEKN 84


>AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA,
           isoform A protein.
          Length = 938

 Score = 35.9 bits (79), Expect = 0.054
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 213 LISPLIIMFPILLVFKLTHWCCCIVWNKN 299
           L+  L+++F ++L+  L + CCC+ W KN
Sbjct: 56  LVLLLVLLFLLILILGLLYACCCVAWEKN 84


>AF145607-1|AAD38582.1|  345|Drosophila melanogaster BcDNA.GH02712
           protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 99  LSTNTTNHNNVHISIHL 49
           LSTNT+++NNVH  +HL
Sbjct: 260 LSTNTSSNNNVHTHLHL 276


>AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA
            protein.
          Length = 2262

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 99   LSTNTTNHNNVHISIHL 49
            LSTNT+++NNVH  +HL
Sbjct: 2177 LSTNTSSNNNVHTHLHL 2193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,047,272
Number of Sequences: 53049
Number of extensions: 503555
Number of successful extensions: 1038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)