Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40226
(624 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 160 3e-38
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 159 5e-38
UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isofor... 146 3e-34
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 134 2e-30
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 130 2e-29
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 116 5e-25
UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1; Caenorhabd... 104 2e-21
UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2; Crypto... 99 1e-19
UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037; cel... 97 4e-19
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 95 9e-19
UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n... 91 2e-17
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 91 2e-17
UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP syntha... 85 1e-15
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 85 1e-15
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 85 1e-15
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 85 1e-15
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 82 9e-15
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 82 1e-14
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 77 3e-13
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 75 2e-12
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 71 2e-11
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 71 3e-11
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 70 4e-11
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 69 9e-11
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 68 2e-10
UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding ... 67 4e-10
UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6; Mycoplas... 66 5e-10
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 66 6e-10
UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1; Nae... 64 3e-09
UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplas... 64 3e-09
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 63 5e-09
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 63 5e-09
UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplas... 62 1e-08
UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplas... 60 3e-08
UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza sativa... 56 9e-07
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 55 2e-06
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 50 3e-05
UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion sp... 47 4e-04
UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3; ... 45 0.001
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 41 0.028
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 40 0.064
UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n... 40 0.064
UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808, w... 39 0.085
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 38 0.15
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 38 0.26
UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n... 38 0.26
UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase alpha/... 38 0.26
UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37; Cyanobacter... 38 0.26
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 37 0.34
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 37 0.45
UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n... 37 0.45
UniRef50_Q9FC33 Cluster: Putative transcription terminator facto... 36 0.60
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.60
UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.60
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 36 1.0
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 35 1.4
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 35 1.4
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 35 1.4
UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n... 35 1.4
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 35 1.4
UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;... 35 1.8
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 34 2.4
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 34 2.4
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 34 2.4
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 34 2.4
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 34 2.4
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 34 2.4
UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B ... 34 3.2
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 34 3.2
UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secreto... 34 3.2
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 34 3.2
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 34 3.2
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 33 4.2
UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_P38168 Cluster: Putative uncharacterized protein YBL100... 33 4.2
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 33 4.2
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 33 4.2
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 33 5.6
UniRef50_Q2S040 Cluster: Transcription termination factor rho; n... 33 5.6
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 33 5.6
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 33 5.6
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 33 5.6
UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4; Sacc... 33 5.6
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 33 5.6
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 33 5.6
UniRef50_UPI0000D99778 Cluster: PREDICTED: hypothetical protein;... 33 7.3
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 33 7.3
UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n... 33 7.3
UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n... 33 7.3
UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph... 33 7.3
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 33 7.3
UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1; Tr... 33 7.3
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 33 7.3
UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n... 33 7.3
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 32 9.7
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 32 9.7
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 32 9.7
UniRef50_Q481G9 Cluster: Signal peptide peptidase SppA, 67K type... 32 9.7
UniRef50_Q2RZM8 Cluster: Uncharacterized protein family; n=1; Sa... 32 9.7
UniRef50_A4J5N4 Cluster: Putative PAS/PAC sensor protein; n=1; D... 32 9.7
UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71, wh... 32 9.7
UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 32 9.7
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 32 9.7
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 32 9.7
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 160 bits (388), Expect = 3e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
ETGRVLSIGDGIARV+GL+N+QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGD
Sbjct: 70 ETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGD 129
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
IVKRTGAIVDVPVGE++LGRV A
Sbjct: 130 IVKRTGAIVDVPVGEELLGRVVDA 153
Score = 100 bits (240), Expect = 2e-20
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERR 513
PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQ+RFN G DE++
Sbjct: 188 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240
Score = 68.9 bits (161), Expect = 9e-11
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
+KKLYCIYVAIGQK STVAQ+VKRLTDA A+ YTI+VSA
Sbjct: 239 KKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSA 277
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 352
LGN IDGKGPI +K+R RVG+KAPGIIPR+SVR
Sbjct: 154 LGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVR 186
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 159 bits (386), Expect = 5e-38
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
ETGRVLSIGDGIARVYGL NIQA+EMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIK+GD
Sbjct: 69 ETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKQGD 128
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
IVKRTGAIVDVPVG+++LGRV A
Sbjct: 129 IVKRTGAIVDVPVGDELLGRVVDA 152
Score = 100 bits (240), Expect = 2e-20
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERR 513
PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ+RFN+ +DE +
Sbjct: 187 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESK 239
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
KKLYCIYVAIGQK STVAQIVKRLTD+GA+ Y++IVSA
Sbjct: 239 KKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSA 276
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 352
LGN IDGKG I+TK R RVGIKAPGIIPRVSVR
Sbjct: 153 LGNAIDGKGAINTKDRFRVGIKAPGIIPRVSVR 185
>UniRef50_Q29596 Cluster: ATP synthase subunit alpha liver isoform,
mitochondrial precursor; n=20; cellular organisms|Rep:
ATP synthase subunit alpha liver isoform, mitochondrial
precursor - Sus scrofa (Pig)
Length = 148
Score = 146 bits (355), Expect = 3e-34
Identities = 70/79 (88%), Positives = 75/79 (94%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
ETGRVLSIGDGIARV+G +N QAEEMVEFSSGLKGM+LNLEPDNVGVVVFGNDKLIKEGD
Sbjct: 70 ETGRVLSIGDGIARVHGXRNXQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGD 129
Query: 183 IVKRTGAIVDVPVGEQILG 239
IVKRTG IVDVPVG+ +LG
Sbjct: 130 IVKRTGXIVDVPVGKDLLG 148
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 134 bits (323), Expect = 2e-30
Identities = 63/84 (75%), Positives = 74/84 (88%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E GRV+S+GDGIARVYGL IQA EMVEF+SG+KGMALNLE +NVG+V+FG+D IKEGD
Sbjct: 28 EIGRVVSVGDGIARVYGLNKIQAGEMVEFASGVKGMALNLENENVGIVIFGSDTAIKEGD 87
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
IVKRTG+IVDVPVG+ +LGRV A
Sbjct: 88 IVKRTGSIVDVPVGKGMLGRVVDA 111
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
PMQTG+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQ++ N
Sbjct: 146 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIN 191
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 492 QG*R*EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
QG +KLYC+YVAIGQK STVAQ+VK L++AGA+ Y+IIV+A
Sbjct: 193 QGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAA 236
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSV 349
LG PIDGKG + R RV +KAPGII R SV
Sbjct: 112 LGVPIDGKGALSAVERRRVEVKAPGIIARKSV 143
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 130 bits (315), Expect = 2e-29
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V+SIGDGIARV+GL +QA EMVEFSSG++GMALNLE DNVG+VV GND+ I+EGD
Sbjct: 50 EYGTVISIGDGIARVFGLTQVQAGEMVEFSSGVRGMALNLETDNVGIVVLGNDREIQEGD 109
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
IVKRTGAIVDVP+G ++LGRV A
Sbjct: 110 IVKRTGAIVDVPIGMEMLGRVFDA 133
Score = 86.6 bits (205), Expect = 4e-16
Identities = 41/54 (75%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFNKGEDERR 513
PMQTG+KAVD LVPIGRGQRELIIGDRQTGKTA+AIDTIINQ+ F+ G+ ++
Sbjct: 168 PMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKPNFDSGDKNKQ 221
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
K+LYCIYVAIGQK STVA +VK LT AGA+ YTI+V+A
Sbjct: 220 KQLYCIYVAIGQKRSTVANLVKILTQAGAMKYTIVVAA 257
Score = 52.4 bits (120), Expect = 8e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSV 349
LGNPIDG GP+ T +R RV +KAPGIIPR SV
Sbjct: 134 LGNPIDGHGPVKTNTRRRVELKAPGIIPRKSV 165
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 116 bits (279), Expect = 5e-25
Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFS-SGLKGMALNLEPDNVGVVVFGNDKLIKEG 179
ETG VLSIGDGIARVYGL N+ A EMVEF +GLKGMALNLE DNVGVV+FG+ I+EG
Sbjct: 27 ETGTVLSIGDGIARVYGLTNVMAGEMVEFEGTGLKGMALNLEADNVGVVLFGDGDSIREG 86
Query: 180 DIVKRTGAIVDVPVGEQILGRV 245
D V RT ++V+VPVG+ +LGRV
Sbjct: 87 DTVLRTKSVVEVPVGKGLLGRV 108
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERRS 516
+ PMQTGIKA+D+LVPIGRGQRELIIGDRQTGKTA+ IDTI+ Q+ N D ++S
Sbjct: 144 SEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIVAQKPVNAEGDPKKS 199
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
+K LYCIYVA+GQK STVA +V+ L + GA+ Y+I+V+A
Sbjct: 197 KKSLYCIYVAVGQKRSTVANLVRTLIEHGAMEYSIVVAA 235
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSV 349
LGNPIDG+GP+ R +KAPGI+PR SV
Sbjct: 112 LGNPIDGRGPLTDVEYRRAEVKAPGIMPRQSV 143
>UniRef50_Q9XXK1-2 Cluster: Isoform b of Q9XXK1 ; n=1;
Caenorhabditis elegans|Rep: Isoform b of Q9XXK1 -
Caenorhabditis elegans
Length = 146
Score = 104 bits (249), Expect = 2e-21
Identities = 48/55 (87%), Positives = 53/55 (96%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKL 167
ETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+NL+ DNVGVVVFGNDK+
Sbjct: 55 ETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVFGNDKI 109
>UniRef50_A3FPS2 Cluster: ATP synthase subunit alpha; n=2;
Cryptosporidium|Rep: ATP synthase subunit alpha -
Cryptosporidium parvum Iowa II
Length = 639
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/82 (54%), Positives = 65/82 (79%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 188
G+V+S+ DGIA+V G+++++ E+VEFSSG KGMALNLE D+VG+V+ G D+ I++GD V
Sbjct: 151 GQVISVADGIAQVDGIRSVKYGELVEFSSGEKGMALNLENDHVGIVILGEDRNIRKGDQV 210
Query: 189 KRTGAIVDVPVGEQILGRVASA 254
T IV+ PVG+++LGRV A
Sbjct: 211 ISTNTIVNCPVGKELLGRVVDA 232
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERRSC 519
TGIK +DSL+PIG GQRE I+GDRQTGKT+L +D I+NQ++F R+ C
Sbjct: 270 TGIKFIDSLIPIGLGQREAIVGDRQTGKTSLVLDIILNQRKFYDDIKTRKYC 321
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 519 YCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
YCIYVAIGQK S+VAQIVK L A+ YTI+++A
Sbjct: 320 YCIYVAIGQKRSSVAQIVKILEKYDALKYTIVIAA 354
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPR 340
LGNPIDGK I + + + +KAPGI+ R
Sbjct: 233 LGNPIDGKPSIISLEKREIDVKAPGIMDR 261
>UniRef50_Q9PR12 Cluster: ATP synthase subunit alpha; n=1037;
cellular organisms|Rep: ATP synthase subunit alpha -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 799
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V+S+GDGI V GL N+ E+V F +G++GMALNLE D VGVV+ G+ IKEGD
Sbjct: 28 EVGNVISLGDGIVLVDGLDNVMLNEIVRFENGVEGMALNLEEDAVGVVLLGDYSNIKEGD 87
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
V RT IV+VPVG+ +LGRV A
Sbjct: 88 RVYRTKRIVEVPVGDVMLGRVVDA 111
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P++TGI ++D++ PIG+GQRELIIGDRQTGKT +AID IINQ+ N
Sbjct: 146 PLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQKGRN 191
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
+ + C+YVAIGQK ST+A +V+ L GA+ YT +V+A
Sbjct: 190 RNVNCVYVAIGQKNSTIANVVRELEAHGAMEYTTVVTA 227
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 95.5 bits (227), Expect = 9e-19
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 7/120 (5%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
+ G V ++GDGI+RV GL+ + E++EF +G GMA+NLE D VG V+ G ++ I+EG
Sbjct: 27 DVGTVCTVGDGISRVNGLEKCMSGELLEFENGTYGMAMNLEQDFVGCVLLGTEEGIREGS 86
Query: 183 IVKRTGAIVDVPVGEQILGRVASAW-------ETLLMARDQSTRNPV*GSVLRRQVSFPV 341
VKRTG IV VPVGE +LGRV +A +L + +P G + R+ V+ P+
Sbjct: 87 NVKRTGRIVSVPVGEAMLGRVVNALGAPIDGKGAILTNETRPVESPAFGIITRKSVNRPL 146
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P+QTGIKA+DS++P+GRGQRELIIGDRQTGKT +A+DTIINQ+ N
Sbjct: 145 PLQTGIKAIDSMIPVGRGQRELIIGDRQTGKTTIALDTIINQKGKN 190
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
K + CIYVAIGQK STVA IV LT A++Y+I+VSA
Sbjct: 189 KNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSA 226
>UniRef50_UPI0000EB1FE1 Cluster: UPI0000EB1FE1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1FE1 UniRef100
entry - Canis familiaris
Length = 383
Score = 91.1 bits (216), Expect = 2e-17
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
+TG VLS GDGI R+ GL+N QAEEMV FSS LK M LNLE D +VV + KEGD
Sbjct: 70 DTGCVLSFGDGIVRISGLRNAQAEEMVGFSS-LKCMCLNLEADM--LVVLHLEMNTKEGD 126
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
VKRTGAI+DV VG+++LGRV A
Sbjct: 127 TVKRTGAIMDVLVGKKLLGRVVGA 150
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVS 620
KKLY IY+A+GQK STV Q+ KRLTDA A I+VS
Sbjct: 207 KKLYYIYIAVGQKRSTVGQL-KRLTDANATKCPIVVS 242
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 337 PCVCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL-AIDTIINQQRFNKGEDER 510
P PM+TGIKAVDSLVPIG GQ E+ D + L I + Q+R G+ +R
Sbjct: 170 PISVQEPMETGIKAVDSLVPIGPGQHEICFSDGSDERKKLYYIYIAVGQKRSTVGQLKR 228
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V+ +GD IA V GL ++ +E++EF G+ G+ALNL+ NVG V+ G+ + IKEG
Sbjct: 30 EVGTVVDVGDSIAHVEGLPSVMTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQ 89
Query: 183 IVKRTGAIVDVPVGEQILGRVAS 251
VKRTG ++ VPVGE +GRV +
Sbjct: 90 KVKRTGDVLSVPVGEAFMGRVVN 112
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/54 (61%), Positives = 47/54 (87%), Gaps = 1/54 (1%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ-QRFNKGEDERR 513
P+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ +DTI+NQ Q + G+ +R+
Sbjct: 148 PLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVDTILNQRQNWESGDPKRQ 201
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
++++ C+YVAIGQK +T+A + + L + GA++YT IV+A
Sbjct: 199 KRQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAA 237
Score = 37.1 bits (82), Expect = 0.34
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 352
LG PIDG+G I+ ++R + ++AP ++ R SV+
Sbjct: 114 LGQPIDGRGDIEAEARRALELQAPSVVQRQSVK 146
>UniRef50_UPI00005A408F Cluster: PREDICTED: similar to ATP synthase
alpha chain, mitochondrial precursor; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to ATP synthase alpha
chain, mitochondrial precursor - Canis familiaris
Length = 301
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +1
Query: 337 PCVCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERR 513
P PM+TGIKAVDSLVPIGRGQ ELII + QTGKT++AIDTIINQ+ N G DE++
Sbjct: 78 PISVREPMKTGIKAVDSLVPIGRGQHELIISNWQTGKTSIAIDTIINQKHLNDGTDEKK 136
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 108 MALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVASA 254
M+LNL PD VGVVVFGNDKLIKEGDIVKRT A VDVPVG+++ G V A
Sbjct: 1 MSLNLGPDKVGVVVFGNDKLIKEGDIVKRTEATVDVPVGKELPGHVVDA 49
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTII 614
+KKLYCIYV IGQK STVAQ+ KRLTDA A+ YTI+
Sbjct: 135 KKKLYCIYVVIGQKRSTVAQLAKRLTDADAMKYTIV 170
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVR 352
LGN DGKGPI +K+ RVG+K PGIIP +SVR
Sbjct: 50 LGNATDGKGPIGSKTHRRVGLKGPGIIPPISVR 82
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = +1
Query: 250 PLGKPY*WQG--TNRHEIPYEGRY*GARYHSPCVCASPMQTGIKAVDSLVPIGRGQRELI 423
PLG+P +G + H +P E +P P+QTG+K +D+L+P+GRGQRELI
Sbjct: 116 PLGRPLDGRGPVASSHRLPIERPASPIMDRAPVTV--PLQTGLKVIDALIPVGRGQRELI 173
Query: 424 IGDRQTGKTALAIDTIINQQRFN 492
+GDRQTGKTA+AIDTI+NQQ N
Sbjct: 174 LGDRQTGKTAIAIDTILNQQGQN 196
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G + SI GIA+V GL + +E+V+F L G+A N++ +GVV+ G + GD
Sbjct: 33 EVGTITSIATGIAKVSGLPGVGFDELVKFPGDLFGIAFNVDEAEIGVVLLGEYWHLHAGD 92
Query: 183 IVKRTGAIVDVPVGEQILGRV 245
V RTG ++DV VG+ +LGRV
Sbjct: 93 EVDRTGRVMDVAVGDGLLGRV 113
Score = 39.5 bits (88), Expect = 0.064
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIV 617
+ + C+Y AIGQ+ S VA++V L + GA+++T +V
Sbjct: 195 QNVLCVYCAIGQRASAVAKVVATLREKGAMDFTTVV 230
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/84 (45%), Positives = 59/84 (70%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E GRV+ +GDG+A V GL A+E++ F+SG++G+ L+LEP +GV++ G + I+ G+
Sbjct: 63 EVGRVIEVGDGVAVVTGLARALADELLIFASGVRGIVLDLEPGRLGVILLGPSEHIRLGE 122
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
V+RT ++ VPVG +LGRV A
Sbjct: 123 DVRRTRKVISVPVGPALLGRVVDA 146
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 486
P+ TGIKA+D+ VP+G GQRELIIGDRQTGKT++A+DT++NQ R
Sbjct: 181 PLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQIR 224
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V++ GDGIA V GL + A E++ F +G G+ALNLE +GVVV G+ I EG
Sbjct: 31 EVGTVVTSGDGIAHVEGLPSAMANELLRFENGTMGIALNLEERQIGVVVLGDSDGIDEGS 90
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
V+ TG ++ VPVGE LGRV A
Sbjct: 91 TVRGTGEVLSVPVGEGYLGRVVDA 114
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/54 (64%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ-RFNKGEDERR 513
P+QTG+KA+DS++PIGRGQR+LIIGDR+TGKTA+AIDTIINQ+ + G+ +++
Sbjct: 150 PLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTIINQKGNWESGDPQKQ 203
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
+K++ CIYVAIGQK STVA++ L AGA+ YT IV A
Sbjct: 201 QKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHA 239
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 82.2 bits (194), Expect = 9e-15
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V DGIA V GL + A E++EF G+ G+ALNL+ +G V+ G+ + I+EG
Sbjct: 30 EVGLVTDTSDGIAHVSGLPSAMANELLEFPGGILGVALNLDATEIGAVILGDYENIQEGQ 89
Query: 183 IVKRTGAIVDVPVGEQILGRV 245
VKRTG ++ VPVG+ LGRV
Sbjct: 90 EVKRTGDVLSVPVGDAFLGRV 110
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDERR 513
P+QTGIKA+D++ PIGRGQR+L+IGDR+TGKTA+ ID I+NQ+ + DE++
Sbjct: 148 PLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDAILNQKANWETGDEKQ 200
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
++++ CIYVAIGQK ST+A + L + GA+ YT IV+A
Sbjct: 199 KQQVRCIYVAIGQKGSTIAGVKAALEEQGAMEYTTIVAA 237
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +3
Query: 36 IARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDV 215
IAR GL N + E+V F++G GM NLE VG++V G+ + I+EGD VKRTG +++V
Sbjct: 1 IARATGLANALSGELVTFNNGAYGMVQNLEESEVGIIVLGSSEGIREGDTVKRTGHVMEV 60
Query: 216 PVGEQILGRVASA 254
PVGE+++GRV +A
Sbjct: 61 PVGEELIGRVVNA 73
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/45 (75%), Positives = 44/45 (97%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
+ P+QTGIKA+D+LVPIGRGQRELIIGDR+TGKT++A+DTI+NQ+
Sbjct: 106 SEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSIAVDTILNQK 150
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 507 EKKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
++ + IYVA+GQK STV + V+ L GA++YTI+V+A
Sbjct: 151 DQDMIVIYVAVGQKDSTVREQVETLKKMGAMDYTIVVNA 189
Score = 34.7 bits (76), Expect = 1.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSV 349
LG PIDG G ++T V KAPG++ R SV
Sbjct: 74 LGQPIDGLGDLNTTKTRPVEAKAPGVMARKSV 105
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 77.0 bits (181), Expect = 3e-13
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P+ TGIK++DS++PIG+GQRELIIGDRQTGKT + IDTIINQ+ N
Sbjct: 121 PLLTGIKSIDSMIPIGKGQRELIIGDRQTGKTTICIDTIINQKNKN 166
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 188
G + I D + V GLKN + EM+ FS +KG+ +L NV +++ N + +G+
Sbjct: 5 GIINKIYDSVVEVLGLKNAKYGEMILFSKNIKGIVFSLNKKNVNIIILNNYNELTQGEKC 64
Query: 189 KRTGAIVDVPVGEQILGRVA-SAWETL 266
T I +VPVG+Q++GR+ S ETL
Sbjct: 65 YCTNKIFEVPVGKQLIGRIINSRGETL 91
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
K + C+YV IGQK S++ I+ +L + YTIIV++
Sbjct: 165 KNIICVYVCIGQKISSLINIINKLKKFNCLEYTIIVAS 202
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/44 (72%), Positives = 40/44 (90%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 495
TG KAVD+++PIGRGQRELI+GDRQTGKT++A+ TIINQ R N+
Sbjct: 175 TGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRSNQ 218
Score = 39.1 bits (87), Expect = 0.085
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 GMALNLEPDN-VGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVAS 251
G+ NLE D +G+++ N ++ G V TG ++ +PVG +LG+V +
Sbjct: 80 GLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVN 129
Score = 35.9 bits (79), Expect = 0.79
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 525 IYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
IYV+IGQ+ S VA+I + L GA+ YT +++A
Sbjct: 229 IYVSIGQRCSNVARIHRLLRSYGALRYTTVMAA 261
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/45 (66%), Positives = 40/45 (88%)
Frame = +1
Query: 343 VCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
VC P+ TGI ++D+++PIGRGQRELIIGDRQTGKT++ +DTI+N
Sbjct: 117 VC-EPLATGIVSIDAMIPIGRGQRELIIGDRQTGKTSICLDTIVN 160
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 70.5 bits (165), Expect = 3e-11
Identities = 29/46 (63%), Positives = 42/46 (91%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P+QTGI ++D L+P+G+GQRELIIGDR+TGKT++A++TII+Q+ N
Sbjct: 126 PVQTGIASIDMLIPLGKGQRELIIGDRRTGKTSVALNTIISQKNTN 171
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNK 495
P+ TG+ VDS+VPIG GQRELIIGDRQ GKTA+AID I+NQ N+
Sbjct: 202 PLLTGLNCVDSMVPIGLGQRELIIGDRQVGKTAVAIDMILNQAFLNE 248
Score = 52.4 bits (120), Expect = 8e-06
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVEF-----------SSG-----LKGMALNLEPDNVG 140
G V + DG+A V L N++ E+V F S G ++GM + +E D +
Sbjct: 50 GEVEKVKDGVAFVTRLGNVRFSELVSFIPAPSRLKSLRSKGNSNLIVEGMVVGIEQDYIS 109
Query: 141 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRV 245
V++FG+++ +K GD V+ G IV + VG +LGRV
Sbjct: 110 VIIFGDERFVKVGDRVRPRGNIVAINVGIGLLGRV 144
Score = 36.7 bits (81), Expect = 0.45
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRL 581
K YCIYV IGQK ST+A+I K L
Sbjct: 269 KPCYCIYVGIGQKQSTIARIAKLL 292
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 68.9 bits (161), Expect = 9e-11
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P+ TG+ +DS+ PIGRGQR+LI+G+RQ+GKT +A+DTIINQ N
Sbjct: 140 PLNTGLAVIDSITPIGRGQRQLILGNRQSGKTQIAVDTIINQHNQN 185
Score = 43.6 bits (98), Expect = 0.004
Identities = 32/105 (30%), Positives = 45/105 (42%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E GRV I DG+ GL+N + V +G+ L L + VG+ + I EG
Sbjct: 22 ENGRVEKISDGVIFSSGLENAALHQAVTIDGRHRGVILELNEEFVGIGLIDKTNDILEGM 81
Query: 183 IVKRTGAIVDVPVGEQILGRVASAWETLLMARDQSTRNPV*GSVL 317
V T ++V + E + GR+ T M D S P S L
Sbjct: 82 SVSVTDHFIEVNLFEDMAGRIIDT--TGKMLYDVSDEQPTASSPL 124
Score = 38.7 bits (86), Expect = 0.11
Identities = 14/37 (37%), Positives = 28/37 (75%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVS 620
+ ++CIYVAIG K + +A++++ L GA++Y+ +V+
Sbjct: 184 QNVHCIYVAIGLKAAYIAEVIETLRKHGAMDYSTVVA 220
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIV 188
GRV + DGIA V GL++ E++ F G+ G A L+ D + VV+ D ++ V
Sbjct: 40 GRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAV 99
Query: 189 KRTGAIVDVPVGEQILGRV 245
RTGA+++VP G Q+LGRV
Sbjct: 100 ARTGAVLEVPAGPQLLGRV 118
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
+ P+ TG+ VD+L IGRGQRELIIGDR TGKT+LAID I+NQ+
Sbjct: 154 SEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQR 198
>UniRef50_Q1PVR1 Cluster: Strongly similar to ATPA gene encoding
subunit alpha of ATP synthase; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Strongly similar to ATPA gene
encoding subunit alpha of ATP synthase - Candidatus
Kuenenia stuttgartiensis
Length = 498
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/43 (65%), Positives = 38/43 (88%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
P+ TGIK +DS++ IG+GQRELIIGD TGK+++AIDT+INQ+
Sbjct: 145 PLYTGIKVIDSMLAIGKGQRELIIGDPSTGKSSIAIDTVINQK 187
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G+VLS+GDGI + GL++ + E++ F SG +G++ +L D++ VV+ I+ GD
Sbjct: 27 EEGKVLSVGDGIVHIAGLRDAKLYELILFESGDEGISFDLGVDSIAVVLLTGRNGIRAGD 86
Query: 183 IVKRTGAIVDVPVGEQILGRVASA 254
+T I V E +LGRV A
Sbjct: 87 TAYKTDRIASVNATEGLLGRVLGA 110
>UniRef50_A5IY82 Cluster: ATP synthase alpha chain; n=6;
Mycoplasmataceae|Rep: ATP synthase alpha chain -
Mycoplasma agalactiae
Length = 524
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 480
+ TGI A+D L+PIG+GQRELIIGDRQTGKT +A++ IINQ
Sbjct: 144 LYTGINAIDLLIPIGKGQRELIIGDRQTGKTHIALNAIINQ 184
Score = 36.7 bits (81), Expect = 0.45
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 522 CIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
CIYVAIGQK ++++I L A+ TII+ A
Sbjct: 191 CIYVAIGQKRESISRIYNTLNQHNALKNTIIIDA 224
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 66.1 bits (154), Expect = 6e-10
Identities = 26/47 (55%), Positives = 42/47 (89%)
Frame = +1
Query: 352 SPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
+P++TGI A+D+++PIGRGQ++LIIGD+ TGKTA+A++ I+ Q++ N
Sbjct: 124 APLETGITAIDAVLPIGRGQKQLIIGDKGTGKTAIALNAILAQEKSN 170
>UniRef50_A0NUS5 Cluster: Putative uncharacterized protein; n=1;
Stappia aggregata IAM 12614|Rep: Putative
uncharacterized protein - Stappia aggregata IAM 12614
Length = 577
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = -2
Query: 227 LSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAI 48
L+D + +D LD ++FF+ V + T++V FQV+GH+L+ E H SLD++Q I
Sbjct: 305 LADWHFHDGAGPLDGVAFFNVTVGAEDNDTNVVGFQVQGHALDTTREFDHFTSLDLVQTI 364
Query: 47 NTSDTITNAQDTT 9
NT DT+T+ + T
Sbjct: 365 NTGDTVTDGEHLT 377
>UniRef50_Q9G8S6 Cluster: ATP synthase F1 subunit alpha; n=1;
Naegleria gruberi|Rep: ATP synthase F1 subunit alpha -
Naegleria gruberi
Length = 550
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFN 492
P TGI VD L+P+G GQRELIIGD+ TGKT+LAI ++NQ+ N
Sbjct: 142 PFLTGINVVDCLIPVGCGQRELIIGDQNTGKTSLAISAVLNQRLVN 187
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVEFSS---GLKGMALNLEPDNVGVVVF-GNDKLIKE 176
G++ SI D + GL+N+ E+V+F S L G LNLE V +V+ G +K
Sbjct: 13 GKIKSIQDNVIIATGLENVFVGEVVKFKSQESNLLGQVLNLEKSQVRIVMINGQQSHLKS 72
Query: 177 GDIVKRTGAIVDVPVGEQILGRVAS 251
D+V RT V G +LGRV S
Sbjct: 73 NDLVYRTYKDVKTKAGYGVLGRVVS 97
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 522 CIYVAIGQKTSTVAQIVKRLTDAGAINYTIIV 617
CIYV +G + S A++ K L GA+NYT +V
Sbjct: 212 CIYVTVGTRRSEGARLKKILDKMGALNYTSMV 243
>UniRef50_Q4A6P2 Cluster: ATP synthase alpha chain; n=2; Mycoplasma
synoviae 53|Rep: ATP synthase alpha chain - Mycoplasma
synoviae (strain 53)
Length = 514
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
TG VD L+PIGRGQR+LIIGDR+TGKT LA++TIINQ+
Sbjct: 134 TGYVVVDLLIPIGRGQRQLIIGDRKTGKTFLALNTIINQK 173
Score = 35.9 bits (79), Expect = 0.79
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 522 CIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
CIYVAIGQ+ + + + L + GA+++TII++A
Sbjct: 179 CIYVAIGQQHAQLTSTYQLLKENGALDHTIIINA 212
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 63.3 bits (147), Expect = 5e-09
Identities = 25/43 (58%), Positives = 39/43 (90%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
P++TGI ++D L+PIG+GQR+LI+GD +TGKT++A+ T+INQ+
Sbjct: 128 PLETGIFSIDILLPIGKGQRQLILGDSKTGKTSIALSTMINQK 170
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/43 (60%), Positives = 37/43 (86%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
P+ TG + VD+LVPIG+GQR+LIIGD TG+++LAID ++NQ+
Sbjct: 154 PLYTGTRLVDTLVPIGKGQRQLIIGDEGTGRSSLAIDAVLNQK 196
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +3
Query: 3 ETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGD 182
E G V S+GDGIA V GL + ++++ F G + L +G V+ + + G
Sbjct: 36 EYGTVASVGDGIAWVTGLPSAAMDDVLMFEDGSWAVVFALTKKRIGAVLLHQSENLTAGT 95
Query: 183 IVKRTGAIVDVPVGEQILGRV 245
+ G +DVPVGE +LGRV
Sbjct: 96 PARLAGRTLDVPVGETLLGRV 116
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 510 KKLYCIYVAIGQKTSTVAQIVKRLTDAGAINYTIIV 617
+++ C+YV IGQK STV ++ L + GA+ YT +V
Sbjct: 198 REVRCVYVLIGQKRSTVVGTIELLRNYGALAYTTVV 233
>UniRef50_Q98PM2 Cluster: ATP SYNTHASE ALPHA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 509
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
+ TGI ++D PIGRGQRE+I+GD+QTGKT +A++TIINQ+
Sbjct: 130 LYTGILSIDLFNPIGRGQREIIVGDKQTGKTHIALNTIINQR 171
Score = 36.3 bits (80), Expect = 0.60
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 522 CIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVSA 623
CIYV+IGQ ++ + L +A A++YTII A
Sbjct: 177 CIYVSIGQNNKNLSNVYTTLKNANALDYTIIFEA 210
>UniRef50_Q600H8 Cluster: ATP synthase alpha chain; n=3; Mycoplasma
hyopneumoniae|Rep: ATP synthase alpha chain - Mycoplasma
hyopneumoniae (strain 232)
Length = 512
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
TGI A+D PIG GQRELI+GDRQTGKT + I+TIINQ+
Sbjct: 127 TGIYAIDLFNPIGFGQRELIVGDRQTGKTHIGINTIINQK 166
>UniRef50_Q2F981 Cluster: Ribosomal protein S2; n=3; Oryza
sativa|Rep: Ribosomal protein S2 - Oryza sativa subsp.
indica (Rice)
Length = 483
Score = 55.6 bits (128), Expect = 9e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQT 441
PMQTG+KAVDSLVPIGRG+RELIIG R+T
Sbjct: 274 PMQTGLKAVDSLVPIGRGRRELIIGGRKT 302
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = -2
Query: 227 LSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAI 48
++ G+V+D LD+++F D V + + THIV F+V+GH +A EL H L V+Q +
Sbjct: 718 VAHGHVHDGLGALDDVAFLDVPVRAEDHDTHIVDFEVQGHPADAARELDHFTGLHVVQPV 777
Query: 47 NTSDTITNAQDTTSL 3
+ + + +A+ L
Sbjct: 778 DPCNPVADAEHAAHL 792
Score = 36.3 bits (80), Expect = 0.60
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2
Query: 623 GRHNDCVVDGTSISQSLHNLSYSRRLLSNGNINAVQLL 510
G H+D V DGTS + L L + LL +G+++AV+LL
Sbjct: 583 GGHDDGVFDGTSFFELLDQLRHGGALLPHGHVDAVELL 620
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = -2
Query: 245 YTPKDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSL 66
+ + L+D +V+D LD ++F + V + + IV +V+GH+ A EL HL L
Sbjct: 465 HAAEQTLADRHVHDGAGPLDGLAFLNLTVGAEDHDADIVLLEVEGHAAHARLELDHLTGL 524
Query: 65 DVLQAINTSDTITNAQ 18
DV++A++ D + + +
Sbjct: 525 DVVEAVDAGDAVADRE 540
>UniRef50_Q01D41 Cluster: ATP synthase alpha chain, sodium ion
specific; n=2; Ostreococcus|Rep: ATP synthase alpha
chain, sodium ion specific - Ostreococcus tauri
Length = 625
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 352 SPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQR 486
+P+ TG+KAVD L P+GRGQ L+ G+ TG + L + TI Q++
Sbjct: 195 TPLVTGVKAVDVLAPLGRGQCMLVSGEPGTGLSELCLTTIAAQKK 239
Score = 37.1 bits (82), Expect = 0.34
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 522 CIYVAIGQKTSTVAQIVKRLTDAGAINYTIIVS 620
C+Y A+G + S V ++ KRL GA+ YT IV+
Sbjct: 244 CVYAALGAQASRVEEVEKRLEQDGAMEYTTIVT 276
>UniRef50_A1FHL5 Cluster: Putative uncharacterized protein; n=3;
Pseudomonadaceae|Rep: Putative uncharacterized protein -
Pseudomonas putida W619
Length = 601
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = -2
Query: 236 KDLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVL 57
+ L++ N+ D+ L +F + ++ T+ + T+ V QV+GH+++A EL H DV
Sbjct: 445 QQFLTNRNLQDAAGALGAHAFGEGVIGTQDHCTYGVLLQVQGHAVDAARELDHFAVHDVG 504
Query: 56 QAINTSDTITNAQDTT 9
Q ++ DT+ N D T
Sbjct: 505 QTVDPHDTVGNRNDGT 520
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 40.7 bits (91), Expect = 0.028
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDER 510
++TGIKA+D +PI RG + I+G GKT + + I N +F + ++
Sbjct: 124 LETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIFNASKFKAPQAQK 174
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 39.5 bits (88), Expect = 0.064
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+ TGI+A+D+L+P G+GQR I G GK+ L
Sbjct: 141 PLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTL 174
>UniRef50_A6CBM4 Cluster: Transcription termination factor Rho; n=1;
Planctomyces maris DSM 8797|Rep: Transcription
termination factor Rho - Planctomyces maris DSM 8797
Length = 543
Score = 39.5 bits (88), Expect = 0.064
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 465
PM ++ +D L PIG+GQR L++ +TGKT L D
Sbjct: 277 PMPITMRIMDMLTPIGKGQRALVVAPPRTGKTMLLQD 313
>UniRef50_A7R4X8 Cluster: Chromosome undetermined scaffold_808,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_808, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 106
Score = 39.1 bits (87), Expect = 0.085
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 63 IQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLI 170
I A E+VEF G + LNLE +NVGVV+ G+ +I
Sbjct: 71 IMASELVEFEEGTIAITLNLESNNVGVVLMGDGLMI 106
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+ T IKA+DS +PIG+GQR I+ GK+ L
Sbjct: 138 PLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTL 171
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 37.5 bits (83), Expect = 0.26
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
+ P+ TG++AVD L+ IG+GQR I GKT L + N
Sbjct: 157 SQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARN 199
>UniRef50_Q5SJE9 Cluster: Transcription termination factor Rho; n=3;
Bacteria|Rep: Transcription termination factor Rho -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 426
Score = 37.5 bits (83), Expect = 0.26
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 352 SPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+P + + +D L PIGRGQR LI+ + GKT L
Sbjct: 159 TPDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTL 193
>UniRef50_A6VWI3 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=4;
Gammaproteobacteria|Rep: H+transporting two-sector
ATPase alpha/beta subunit central region - Marinomonas
sp. MWYL1
Length = 318
Score = 37.5 bits (83), Expect = 0.26
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 322 ARYHSPCV--CASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
A + SPC+ + Q ++A+D + PIG GQR LI+ +GKT +
Sbjct: 40 AIHPSPCIHLASGSSQRTVRAMDLITPIGMGQRGLIVAPPGSGKTTM 86
>UniRef50_Q55738 Cluster: DNA gyrase subunit A; n=37;
Cyanobacteria|Rep: DNA gyrase subunit A - Synechocystis
sp. (strain PCC 6803)
Length = 860
Score = 37.5 bits (83), Expect = 0.26
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 78 MVEFSSGLK-GMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV----DVPVGEQILGR 242
++ SSG+ GMA N+ P N+G V+ G LI+ +I ++ + D P G QILGR
Sbjct: 168 LINGSSGIAVGMATNIPPHNLGEVIDGAIALIRNPEITEQELMQIIPGPDFPTGAQILGR 227
Query: 243 VASAWETLLMARDQSTRNPV 302
+ E L R T V
Sbjct: 228 -SGIREAYLTGRGSITMRGV 246
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 37.1 bits (82), Expect = 0.34
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 250 PLGKPY*WQGTNRHEIPYEGRY*GARYHSPCVCASPMQTGIKAVDSLVPIGRGQRELIIG 429
PL +P +GT R + Y + + + +G+ AVD+L PI GQR I+G
Sbjct: 117 PLCRPLDDKGTVRLDDTRPLFYEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQRIAILG 176
Query: 430 DRQTGKTALAIDTIINQ 480
D + GK+ +NQ
Sbjct: 177 DTKAGKSTFLGQLGVNQ 193
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 36.7 bits (81), Expect = 0.45
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 361 QTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
Q ++ VD + PIG+GQR +I+ +TGKT L
Sbjct: 382 QVAMRMVDLISPIGKGQRGMIVSQPKTGKTTL 413
>UniRef50_A6DIN5 Cluster: Transcription termination factor Rho; n=1;
Lentisphaera araneosa HTCC2155|Rep: Transcription
termination factor Rho - Lentisphaera araneosa HTCC2155
Length = 613
Score = 36.7 bits (81), Expect = 0.45
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 286 RHEIPYEGRY*GARYHSPCVCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+++IP+E + + P ++ +D +VP+G GQR LI+ +TGKT L
Sbjct: 326 KNKIPFESLTPDFPEYRMHMETEPTNHSMRVLDLVVPVGAGQRGLIVAPPRTGKTVL 382
>UniRef50_Q9FC33 Cluster: Putative transcription terminator factor;
n=2; Streptomyces|Rep: Putative transcription terminator
factor - Streptomyces coelicolor
Length = 415
Score = 36.3 bits (80), Expect = 0.60
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ VD L P+G+GQR LI+ +TGKT L
Sbjct: 152 RVVDLLAPVGKGQRGLIVAPPKTGKTVL 179
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 36.3 bits (80), Expect = 0.60
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 465
+ VD PIG+GQR LI+ +TGKT L D
Sbjct: 507 RVVDLFAPIGKGQRALIVAQPKTGKTILMKD 537
>UniRef50_A4M4Z8 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 519
Score = 36.3 bits (80), Expect = 0.60
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = -2
Query: 215 NVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSD 36
N+ D D ++F D + + +V +V+ H+ +A GEL L +++ ++T D
Sbjct: 416 NLDDLAGQFDRVAFLDLGELAEDRRADVVFLEVQNHAGDAAGELEELACHRLVKTVDTCD 475
Query: 35 TITNAQD 15
T+T+ +
Sbjct: 476 TVTDGDN 482
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 471
+ P TGIK +D L P+ +G + + G GKT L ++ I
Sbjct: 129 SEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELI 169
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P + +D + PIG+GQR LI+ +TGKT L
Sbjct: 217 PSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL 250
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
++TGIK +D L+PI +G + ++G GKT + + I +F+ G
Sbjct: 429 LETGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELINAFIKFHDG 475
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 352 SPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+PMQ G++A+D+ +P+G GQR + GK+ L
Sbjct: 147 APMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTL 181
>UniRef50_A3ZQF8 Cluster: Transcription termination factor Rho; n=2;
Planctomycetaceae|Rep: Transcription termination factor
Rho - Blastopirellula marina DSM 3645
Length = 444
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ VD L P+G+GQR L++ +TGKT L
Sbjct: 181 RIVDLLTPLGKGQRALVVAPPRTGKTML 208
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 352 SPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAID 465
+P + + +D ++PIG+GQR LI+ + GKT + D
Sbjct: 336 TPDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQD 373
>UniRef50_UPI00006C0889 Cluster: PREDICTED: hypothetical protein;
n=3; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 535
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 150 ILPHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERYHHQ 25
+L H H VPS P +PP QP S H H+ +HHQ
Sbjct: 19 LLSHSHASVPSKSP-------SPPILQPAGSHPHAHQHHHHQ 53
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 501
+ +D ++PIG+GQR LI+ + GKT + + I N N E
Sbjct: 490 RVIDLIMPIGKGQRALIVSPPKAGKTTI-LQNIANAISTNNPE 531
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ TG++A+D ++ IGRGQR I GK++L
Sbjct: 152 LMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSL 184
>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=1; Opitutaceae
bacterium TAV2|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Opitutaceae
bacterium TAV2
Length = 403
Score = 34.3 bits (75), Expect = 2.4
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTALAID 465
+AVD P+G+G R LI+ +TGKT L D
Sbjct: 146 RAVDLFCPVGKGTRGLIVAPPRTGKTTLLRD 176
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGE 501
+ +D + PIG+GQR LI+ +TGKT + + I N N E
Sbjct: 440 RIIDLVAPIGKGQRGLIVAPPKTGKT-MIMQAIANAITHNNPE 481
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
+ TGIK VD L P RG + + G GKT L ++ I N + + G
Sbjct: 211 LATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 257
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGED 504
+ TGIK +D VPI +G + I G GKT + + I N R D
Sbjct: 122 INTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDSND 170
>UniRef50_UPI0000DB7ADE Cluster: PREDICTED: similar to RhoGAP93B
CG3421-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to RhoGAP93B CG3421-PA - Apis mellifera
Length = 1054
Score = 33.9 bits (74), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 96 LRRTPPSPQPGCSSSHKHERYHHQCSRH 13
L+ +PPSP P H H +HH ++H
Sbjct: 18 LQTSPPSPSPSSRRHHHHHHHHHHNNKH 45
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 33.9 bits (74), Expect = 3.2
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTII--NQQRFN 492
TGI+A+D+L+ IG GQR I + GK++L + TI +QQ N
Sbjct: 143 TGIRAIDALLTIGEGQRVGIFSEPGGGKSSL-LSTIAKGSQQTIN 186
>UniRef50_A2WHU5 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=1; Burkholderia dolosa AUO158|Rep:
Flagellar biosynthesis/type III secretory pathway ATPase
- Burkholderia dolosa AUO158
Length = 390
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 459
TG++A+D L+ G GQR I + TGKT L+
Sbjct: 140 TGVRAIDGLMTCGIGQRVGIFAEAGTGKTTLS 171
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 33.9 bits (74), Expect = 3.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 343 VCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
+ A +TGIK VD L P +G + + G GKT L ++ I N
Sbjct: 203 ITAPLFETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRN 247
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 33.9 bits (74), Expect = 3.2
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
A + TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 156 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 205
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+QTG++A+D+++ G GQR I GK+ L
Sbjct: 153 PLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTL 186
>UniRef50_A4QBV3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum R|Rep: Putative
uncharacterized protein - Corynebacterium glutamicum
(strain R)
Length = 386
Score = 33.5 bits (73), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 81 PSPQPGCSSSHKHERYHHQCSRHDQSL 1
P PQ SH H+R HH RHD+++
Sbjct: 216 PHPQRNAQRSHTHQREHHGHQRHDEAV 242
>UniRef50_P38168 Cluster: Putative uncharacterized protein
YBL100C; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBL100C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 104
Score = 33.5 bits (73), Expect = 4.2
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 64 MFFKP*TRAIPSPMLKTRPVS 2
M FKP TRAIPSP +T PVS
Sbjct: 1 MLFKPKTRAIPSPTARTLPVS 21
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P + + V + PIG+GQR LI+ + GKT L
Sbjct: 170 PNELSTRVVSLIAPIGKGQRGLIVAPPKAGKTVL 203
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 33.5 bits (73), Expect = 4.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
TGIK VD L P +G + + G GKT L ++ I N + + G
Sbjct: 185 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 33.1 bits (72), Expect = 5.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQ 483
P +GI A+D L+ G+GQR I G GK+ L + N +
Sbjct: 145 PFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNK 187
>UniRef50_Q2S040 Cluster: Transcription termination factor rho; n=1;
Salinibacter ruber DSM 13855|Rep: Transcription
termination factor rho - Salinibacter ruber (strain DSM
13855)
Length = 373
Score = 33.1 bits (72), Expect = 5.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 370 IKAVDSLVPIGRGQRELIIGDRQTGKTALAID 465
++ +D + P+G+GQR LI+ + GKT L D
Sbjct: 113 MRVLDLVAPLGKGQRALIVSPPRAGKTVLLKD 144
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 33.1 bits (72), Expect = 5.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
M GI+A+D V GRGQR I G GK+ L
Sbjct: 143 MPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTL 175
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 33.1 bits (72), Expect = 5.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 343 VCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
V A+P TG++A+D L+ G GQR I GK+ +
Sbjct: 142 VIATPFATGVRAIDGLLTCGVGQRTGIFAPAGGGKSTI 179
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 33.1 bits (72), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ TG++A+D+ P+GRGQR + GK+ L
Sbjct: 159 LPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTL 191
>UniRef50_O94034 Cluster: Nucleotide phosphodiesterase; n=4;
Saccharomycetales|Rep: Nucleotide phosphodiesterase -
Candida albicans (Yeast)
Length = 571
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 203 STSTLDNISFFDKLVITKYYHTHIVRFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITN 24
+TS LDN+ F DK ++ +++ TH+ ++G + + G+L+ +S N + N
Sbjct: 75 NTSKLDNLPFSDKSLLIQFFFTHLNILMIQGENSDE-GKLYQEISSAKELLTNRISRVGN 133
Query: 23 AQDTT 9
TT
Sbjct: 134 WTGTT 138
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 33.1 bits (72), Expect = 5.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+ TGI+A+DS+ G GQR I GK+ L
Sbjct: 138 PLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTL 171
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 349 ASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
A ++TGIK VD L P RG + + G GKT + I N + + G
Sbjct: 164 AEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGG 213
>UniRef50_UPI0000D99778 Cluster: PREDICTED: hypothetical protein;
n=3; Eutheria|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 394
Score = 32.7 bits (71), Expect = 7.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 87 TPPSPQPGCSSSHKHERYHHQCSRH 13
TPPSP P S H H +HH H
Sbjct: 86 TPPSPSPPPSHHHHHHHHHHHHHHH 110
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
++TGIK +D L+PI G + ++G GKT + + +IN
Sbjct: 341 LETGIKVIDVLLPIPSGGKTGLLGGAGVGKT-VVVQELIN 379
>UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n=1;
Salinibacter ruber DSM 13855|Rep: Transcription
termination factor Rho - Salinibacter ruber (strain DSM
13855)
Length = 472
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 367 GIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
G + +D PIG+GQR LI+ + GKT L
Sbjct: 213 GPRILDLFAPIGKGQRGLIVSPPKAGKTVL 242
>UniRef50_Q1AVG2 Cluster: Transcription termination factor Rho; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Transcription
termination factor Rho - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 498
Score = 32.7 bits (71), Expect = 7.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P + +D + PIG+GQR LI+ + GKT +
Sbjct: 230 PNDIAPRVIDLVAPIGKGQRGLIVSPPKAGKTTI 263
>UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase,
alpha/beta subunit, central region; n=1; Geobacter
uraniumreducens Rf4|Rep: H+-transporting two-sector
ATPase, alpha/beta subunit, central region - Geobacter
uraniumreducens Rf4
Length = 524
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+ TG +AVD L P+ RG + G TGKT L
Sbjct: 187 PLVTGQRAVDFLFPLARGGAAVFPGGFGTGKTVL 220
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ TG++AVD L+ GRGQR I GK+ L
Sbjct: 147 LSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTL 179
>UniRef50_A2F8P6 Cluster: ABC transporter family protein; n=1;
Trichomonas vaginalis G3|Rep: ABC transporter family
protein - Trichomonas vaginalis G3
Length = 536
Score = 32.7 bits (71), Expect = 7.3
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 370 IKAVDSL-VPIGRGQRELIIGDRQTGKTAL 456
IKA+DSL +GRG+ LIIG +GKT L
Sbjct: 232 IKAIDSLDFTVGRGETILIIGPNGSGKTTL 261
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 32.7 bits (71), Expect = 7.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 328 YHSPCVCASPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
Y S P+ TG++A+D L+ G GQR I GKT L
Sbjct: 126 YASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTML 168
>UniRef50_Q92HL2 Cluster: Transcription termination factor rho;
n=164; cellular organisms|Rep: Transcription termination
factor rho - Rickettsia conorii
Length = 458
Score = 32.7 bits (71), Expect = 7.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 373 KAVDSLVPIGRGQRELIIGDRQTGKTAL 456
+ ++ + P+G+GQR LI+ +TGKT L
Sbjct: 192 RVIELVAPMGKGQRALIVAPPRTGKTVL 219
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 32.3 bits (70), Expect = 9.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 254 LGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVRHLCRL 367
LGNPIDGKGP+ + + V P + R +R + L
Sbjct: 108 LGNPIDGKGPLKYEKSIPVNNTPPDPLERKRIREVMPL 145
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 355 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAL 456
P+ G++A+D+L+ +G GQR I GK+ L
Sbjct: 138 PLSLGVRALDALITVGMGQRIGIFAGSGVGKSTL 171
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTI 471
TGIK +D L P+ +G + + G GKT ++ I
Sbjct: 164 TGIKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELI 199
>UniRef50_Q481G9 Cluster: Signal peptide peptidase SppA, 67K type;
n=3; Proteobacteria|Rep: Signal peptide peptidase SppA,
67K type - Colwellia psychrerythraea (strain 34H / ATCC
BAA-681) (Vibriopsychroerythus)
Length = 637
Score = 32.3 bits (70), Expect = 9.7
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 33 GIARVYGLK-NIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIV 209
G+A ++ L N +E ++ + + M L E D + + K KE +V G +
Sbjct: 480 GMANLFQLSINRGYQEFIQLVATNRDMTLE-EVDAIAQGRVWSGKKAKELGLVDELGNLT 538
Query: 210 DVPVGEQILGRVASAWETLLMARDQSTRNPV 302
D V L ++ ++TLL+ ++QS+RN +
Sbjct: 539 DAVVAAATLAKLEQ-YDTLLIEKEQSSRNKI 568
>UniRef50_Q2RZM8 Cluster: Uncharacterized protein family; n=1;
Salinibacter ruber DSM 13855|Rep: Uncharacterized
protein family - Salinibacter ruber (strain DSM 13855)
Length = 469
Score = 32.3 bits (70), Expect = 9.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 186 VKRTGAIVDVPVGEQILGRVASAWETLLMARDQST 290
VKR G +VD V + +LG VA A L AR + T
Sbjct: 251 VKRIGGVVDAKVNDVLLGAVAGALRYYLAARTEPT 285
>UniRef50_A4J5N4 Cluster: Putative PAS/PAC sensor protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative PAS/PAC
sensor protein - Desulfotomaculum reducens MI-1
Length = 547
Score = 32.3 bits (70), Expect = 9.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 587 ISQSLHNLSYSRRLLSNGNINAVQLLLSSSPLLNRC 480
+S +H+L Y+ RL NGN+ QL+ + + L N C
Sbjct: 353 MSTIIHSLDYNLRLHKNGNLKGDQLMHNLNDLRNHC 388
>UniRef50_A7QAH4 Cluster: Chromosome undetermined scaffold_71,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_71, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 43
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 9 GRVLSIGDGIARVYGLKNIQAEEMVE 86
G VL +GDGIA ++GL + A E+V+
Sbjct: 17 GTVLQVGDGIACIHGLNEVIASELVK 42
>UniRef50_A5C604 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 256
Score = 32.3 bits (70), Expect = 9.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 96 LRRTPPSPQP-GCSSSHKHERYHHQCSRHDQSL 1
LR P P+P GC S +HH+C +D+SL
Sbjct: 205 LRVHQPHPEPEGCQDSKLSTGFHHECVENDRSL 237
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 32.3 bits (70), Expect = 9.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
+ TGI+A+DS + +G GQR + GKT L + N
Sbjct: 152 LPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARN 191
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 32.3 bits (70), Expect = 9.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 358 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIIN 477
++TG+K +D L P +G + G GKT L ++ I N
Sbjct: 132 LETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRN 171
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 32.3 bits (70), Expect = 9.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 364 TGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKG 498
TGIK +D L P +G + + G GKT L ++ I N + + G
Sbjct: 136 TGIKVIDLLEPYSKGGKIGLFGGAGVGKTVLIMELINNIAKKHNG 180
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,649,036
Number of Sequences: 1657284
Number of extensions: 13604948
Number of successful extensions: 39651
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 37581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39549
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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