Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40226
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 537  WQHKCSTTSSLIFTLVESLLVDDSINS 457
            WQ K +T+++   T   S L+DD  +S
Sbjct: 1183 WQTKTTTSTTTRPTTTVSQLIDDKCDS 1209


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 54  LKNIQAEEMVEFSSGLKGMALNLEPD 131
           +KN     +++F+ GLK + +++  D
Sbjct: 575 IKNFNIPSILQFNDGLKNLEIHVTKD 600


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 384 VNSLDTSLHR*RTDTRGMIPGALIPTLIRDFVSI 283
           VN  D S    R  +RG+IP A + T+   FV +
Sbjct: 227 VNGSDNSR---RASSRGLIPRAKVKTIKITFVIV 257


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 331 HSPCVCASPMQTGIKAVDSLVP 396
           H  CV A  ++ GI   + ++P
Sbjct: 151 HCQCVLADGVERGILTANRMIP 172


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 331 HSPCVCASPMQTGIKAVDSLVP 396
           H  CV A  ++ GI   + ++P
Sbjct: 151 HCQCVLADGVERGILTANRMIP 172


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 308 PSYGISCRLVPCHQ*GFPSGCYTPKDL 228
           PS G+   + P H  G PSG   P+ +
Sbjct: 52  PSVGLRQGIPPHHYGGPPSGGQPPQGM 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,356
Number of Sequences: 336
Number of extensions: 3347
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)