Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40225
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 171 3e-43
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 169 1e-42
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 167 5e-42
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 165 3e-41
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 50 1e-06
03_01_0034 + 318432-318825,318902-319851 50 1e-06
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 50 1e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 50 1e-06
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 50 2e-06
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 50 2e-06
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 50 2e-06
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 48 7e-06
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 34 0.093
05_07_0242 + 28615573-28616304 32 0.28
01_06_1014 - 33810112-33811995 31 0.49
10_06_0188 - 11603941-11604528 30 1.5
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 1.5
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 2.6
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 3.5
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 4.6
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 6.1
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 6.1
01_04_0043 + 15375459-15377606 28 6.1
10_08_0842 - 20954712-20957738 27 8.0
06_01_0500 + 3584743-3585516 27 8.0
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 27 8.0
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN TA+AE ++R+
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRI 391
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSV EITNA FEP++ M KCDP ++A C
Sbjct: 286 LSVPEITNAVFEPSSMMAKCDP-RHGKYMACC 316
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 169 bits (412), Expect = 1e-42
Identities = 71/85 (83%), Positives = 82/85 (96%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN+T++ E ++R+
Sbjct: 367 DLAKVQRAVCMISNSTSVVEVFSRI 391
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEP++ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPSSMMAKCDP-RHGKYMACC 316
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 167 bits (406), Expect = 5e-42
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVP G
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN+T++ E ++R+
Sbjct: 367 DLAKVQRAVCMISNSTSVVEVFSRI 391
Score = 99 bits (238), Expect = 1e-21
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 113
HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 393 HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEP++ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPSSMMAKCDP-RHGKYMACC 316
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 165 bits (400), Expect = 3e-41
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ +IKT+RT+QFVDWCPTGFK GINYQPPT VPGG
Sbjct: 388 PRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGG 447
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKV+RAVCM+SN TA+AE ++R+
Sbjct: 448 DLAKVRRAVCMISNNTAVAEVFSRI 472
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 475 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 569 SVAEITNACFEPANQMVKCDPVMASTWLAVC 477
SV EITN+ FEPA+ M KCDP ++A C
Sbjct: 368 SVPEITNSVFEPASVMAKCDP-RHGKYMACC 397
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 564 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 485 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP------ 538
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
+ A + N+T+I E + R++ T+
Sbjct: 539 --RGLSMASTFVGNSTSIQEMFRRVSEQFTA 567
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 405 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 326 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP------ 379
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
+ A + N+T+I E + R++ T+
Sbjct: 380 --RGLSMASTFIGNSTSIQEMFRRVSEQFTA 408
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP------ 358
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
+ A + N+T+I E + R++ T+
Sbjct: 359 --RGLSMASTFIGNSTSIQEMFRRVSEQFTA 387
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP------ 358
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 359 --IGLKMASTFIGNSTSIQEMFRRVSEQFTA 387
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP------ 358
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 359 --RGLKMAATFVGNSTSIQEMFRRVSEQFTA 387
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPN----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 321 PRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP------ 374
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
+ A + N+T+I E + R++ T+
Sbjct: 375 --VGLSMASTFVGNSTSIQEMFRRVSEQFTA 403
Score = 47.2 bits (107), Expect = 9e-06
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 400 QFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 33.9 bits (74), Expect = 0.093
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -2
Query: 498 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 370
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 85 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRT 210
L +P P R P LL P + QP PH L PP+P+ T
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHT 130
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.49
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 232 AKRAFVHWYVGEGMEEGEFSEAREDL 155
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>10_06_0188 - 11603941-11604528
Length = 195
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/99 (27%), Positives = 36/99 (36%)
Frame = -2
Query: 390 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLATSSTSCTPSVLSCT 211
C F P +VPG D+ A L A A+ WA +++ TPS T
Sbjct: 44 CRRAFSAAELPAAPPIVPGTDMYFCTWAFFPLGPPAAAADGWAPFTPFNSAPTPSPPPAT 103
Query: 210 GTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVR 94
+ +P P R P+ R K LK R R
Sbjct: 104 AAA-------PAPAPARAGGPTSR---KKMCVSLKGRAR 132
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 94 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 222
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 154 PGPHGLRRTLPPPYPHRRTSARKH 225
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 234
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -2
Query: 228 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 58
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 106 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 234
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 104 AFSGVHADFFVILLEGSQVLTG 169
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 477 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 298
LY D DV A + + +Q ++ P G+++G PP V G + + R +C
Sbjct: 180 LYGQDQGDHDVQAPPLLVMGEEKLQ-IEARPQGYRIGRTSPPPLCVDAGHVVTMDR-ICR 237
Query: 297 L 295
L
Sbjct: 238 L 238
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 437 PSLPSKPSVLSNSSTGVQPVSRSVSTT 357
PSLPS+P+ L S++ QP +R V T
Sbjct: 257 PSLPSRPAGLGASTSLSQPSARPVQQT 283
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 142 SRGQPGPHGLRRTLPPPYPHRRTSA 216
S+ P P +R PPP PHRR A
Sbjct: 9 SKKMPTPAVMRIRSPPPDPHRRARA 33
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 94 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 204
P P S R PS P P + PPP PHR
Sbjct: 21 PKPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHR 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,616,234
Number of Sequences: 37544
Number of extensions: 421219
Number of successful extensions: 1778
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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