Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40225
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 171 2e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 171 2e-43
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 171 3e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 171 3e-43
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 171 3e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 167 3e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 166 8e-42
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 52 2e-07
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 51 6e-07
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 50 1e-06
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 50 1e-06
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 50 1e-06
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 50 1e-06
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 50 1e-06
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 50 1e-06
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 50 1e-06
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 40 0.002
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 38 0.005
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 31 0.41
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 0.95
At5g04190.1 68418.m00407 phytochrome kinase substrate-related co... 29 1.7
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 2.9
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 3.8
At1g73340.1 68414.m08489 cytochrome P450 family protein similar ... 28 3.8
At1g68080.1 68414.m07777 expressed protein 28 3.8
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 3.8
At3g26855.1 68416.m03360 hypothetical protein 28 5.1
At1g01220.1 68414.m00036 GHMP kinase-related contains similarity... 27 6.7
At5g55330.1 68418.m06895 membrane bound O-acyl transferase (MBOA... 27 8.9
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 2e-43
Identities = 72/85 (84%), Positives = 81/85 (95%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN TA+AE ++R+
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRI 391
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSV EITNA FEPA+ M KCDP ++A C
Sbjct: 286 LSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 2e-43
Identities = 72/85 (84%), Positives = 81/85 (95%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN TA+AE ++R+
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRI 391
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSV EITNA FEPA+ M KCDP ++A C
Sbjct: 286 LSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN+T++AE ++R+
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRI 391
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEPA+ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN+T++AE ++R+
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRI 391
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEPA+ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN+T++AE ++R+
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRI 391
Score = 99.5 bits (237), Expect = 1e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 116
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEPA+ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 167 bits (407), Expect = 3e-42
Identities = 71/80 (88%), Positives = 78/80 (97%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAE 271
DLAKVQRAVCM+SN+T++AE
Sbjct: 367 DLAKVQRAVCMISNSTSVAE 386
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 572 LSVAEITNACFEPANQMVKCDPVMASTWLAVC 477
LSVAEITN+ FEPA+ M KCDP ++A C
Sbjct: 286 LSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 166 bits (404), Expect = 8e-42
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARL 256
DLAKVQRAVCM+SN TA+AE ++R+
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRI 391
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = -1
Query: 253 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 122
HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 393 HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 35.9 bits (79), Expect = 0.019
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3
Query: 569 SVAEITNACFEPANQMVKCDPVMASTWLAVC 477
SV EIT + FEP+N M KCDP ++A C
Sbjct: 287 SVPEITTSVFEPSNMMAKCDP-RHGKYMACC 316
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + PPT
Sbjct: 306 PRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT----- 360
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 361 ---GIKMASTFVGNSTSIQEMFRRVSEQFTA 388
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 385 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/91 (28%), Positives = 46/91 (50%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + PP
Sbjct: 306 PRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP------ 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 --KGLKMAATFVGNSTSIQEMFRRVSEQFTA 388
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 385 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + + P G
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG 360
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
+ A + N+T+I E + R++ T+
Sbjct: 361 ----LSMASTFIGNSTSIQEMFRRVSEQFTA 387
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 305 PRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT----- 359
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 360 ---GLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + + P G
Sbjct: 305 PRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG 360
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 361 ----LKMASTFIGNSTSIQEMFRRVSEQFTA 387
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = -1
Query: 250 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 128
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/91 (26%), Positives = 47/91 (51%)
Frame = -2
Query: 510 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
PRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + + P G
Sbjct: 305 PRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG 360
Query: 330 DLAKVQRAVCMLSNTTAIAEAWARLATSSTS 238
++ A + N+T+I E + R++ T+
Sbjct: 361 ----LKMASTFIGNSTSIQEMFRRVSEQFTA 387
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = -2
Query: 498 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 343
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = -2
Query: 498 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 343
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 255 ATSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 154
++S + +P+V+S S R WR SS P+R W
Sbjct: 33 SSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 355 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 459
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At5g04190.1 68418.m00407 phytochrome kinase substrate-related
contains similarity to Swiss-Prot:Q9SWI1 phytochrome
kinase substrate 1 [Arabidopsis thaliana]
Length = 406
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -2
Query: 303 CMLSNTTAIAEAWARLATSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKS 124
C S + + E+ R+A T V + V + SSP+P+R +PS +T+
Sbjct: 145 CSSSKSVQVQESKPRIAVPKTGSDRIV---SNRIVHSHQTISSPEPIRLTIPSNTVTRSI 201
Query: 123 AWTPLKARVREPKS 82
+T K R P S
Sbjct: 202 DYTANK-EARAPVS 214
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 133 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 249
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 471 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 328
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g73340.1 68414.m08489 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana];
contains Pfam profile: PF00067 cytochrome P450
Length = 512
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 339 PGGDLAKVQRAVCMLSNTTAIAEAWARLATSSTSCTPSVLSCTGTSVRVWRRESSP 172
PG +LA++Q A+ + T W +L S PS G +++ RR+S P
Sbjct: 456 PGAELARLQIALFLHYFITTYK--WTQLKEDRISFFPSARLVNGFKIQLNRRDSDP 509
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 397 DELDSTLGFDGSDGRVHILGYDVTTVQ 477
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 46 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 207
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 208 TSA 216
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 240 SCTPSVLSCTGTSVRVWRRESSPK 169
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
>At1g01220.1 68414.m00036 GHMP kinase-related contains similarity to
L-fucose kinase [Homo sapiens] gi|21212956|emb|CAD29647
Length = 1055
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 285 TAIAEAWARLATSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSR 142
+A AW+ L SC P +L G+ + E V W+PSR
Sbjct: 277 SARGRAWSDLVALGCSCQPMILELIGSKKEMSLYEDL---VAAWVPSR 321
>At5g55330.1 68418.m06895 membrane bound O-acyl transferase (MBOAT)
family protein / wax synthase-related contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 346
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 8 SFFYFISPECKTVRVRHKRYFIGLVLFGSLTLAFSGVHADFFV 136
++ Y+++P+ KT +R VLF + + FS VH+ F +
Sbjct: 20 TYCYYLTPKIKTSLLRLLSVLPVCVLFLIIPIFFSTVHSSFTI 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,182
Number of Sequences: 28952
Number of extensions: 296675
Number of successful extensions: 1179
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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