Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40224
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 83 3e-16
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 51 9e-07
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 42 3e-04
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 40 0.001
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 35 0.050
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 31 0.81
SB_59650| Best HMM Match : Adap_comp_sub (HMM E-Value=0.01) 30 1.9
SB_8827| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/86 (46%), Positives = 61/86 (70%)
Frame = -1
Query: 514 RKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRS 335
++DI +SI +E SG ++ G+ +C ++ +FA+RL+ SMKG GT+D LIR+VVSRS
Sbjct: 60 QRDIMNSIDREMSGDLKAGL----QCARNPAEYFADRLWKSMKGAGTDDSLLIRVVVSRS 115
Query: 334 EIDLGDIKQAFLEKYGKSLETWIADD 257
E+DL +IK +FL+KY K++ I D
Sbjct: 116 EVDLVEIKASFLQKYHKTVYKMIEGD 141
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 612 RSMGTDESIFNSILITRSYQQLRQIFAEY 526
+ GTDES FN +L +RS+ QL+ F EY
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEY 55
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = -1
Query: 403 LYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDT 254
LYY+MKG+GT + LI I+ +RS ++ +IKQ + +KYG+SL + +T
Sbjct: 521 LYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSET 570
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 612 RSMGTDESIFNSILITRSYQQLRQIFAEY 526
+ GTDE F I TRSY QL+ +F EY
Sbjct: 184 KKWGTDEDCFIEIFTTRSYPQLQAMFPEY 212
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 603 GTDESIFNSILITRSYQQLRQIFAEYEALTG 511
GTDE F +IL RS ++ + AEY+ L+G
Sbjct: 613 GTDEDQFITILSQRSSAHVQAVLAEYKTLSG 643
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 603 GTDESIFNSILITRSYQQLRQIFAEYEALTG 511
GT+E F +IL RS ++ + AEY L+G
Sbjct: 786 GTEEDQFITILTQRSSAHVQAVLAEYRTLSG 816
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 612 RSMGTDESIFNSILITRSYQQLRQIFAEYEALTGKTL 502
+ +GT E+ IL TRS ++++I EY G++L
Sbjct: 526 KGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSL 562
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/67 (34%), Positives = 44/67 (65%)
Frame = -1
Query: 535 RRVRSFDRKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLI 356
+R ++ KD+ + +K E SG++E+ +LA+ ++ V + A+ L M+G GT+++TLI
Sbjct: 24 KRYKTMYGKDLMNDLKSELSGNLEECLLAM---MEPSVLYDAKCLRRGMRGAGTDEETLI 80
Query: 355 RIVVSRS 335
I+ +RS
Sbjct: 81 DILCTRS 87
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 612 RSMGTDESIFNSILITRSYQQLRQIFAEY 526
+ GTDES FN +L +RS+ QL+ F EY
Sbjct: 116 KKWGTDESRFNVVLASRSFPQLQATFNEY 144
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/86 (26%), Positives = 46/86 (53%)
Frame = -1
Query: 511 KDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSE 332
+D+ +K E G E ++A+ + + A L ++KG+GT++ LI ++ +R+
Sbjct: 132 RDLIKDLKSEVGGYFEDTVIAL---MTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTN 188
Query: 331 IDLGDIKQAFLEKYGKSLETWIADDT 254
++ I+ A+ + + LE IA DT
Sbjct: 189 DEIIAIRNAYNTLFSRDLEKDIAGDT 214
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -2
Query: 603 GTDESIFNSILITRSYQQLRQIFAEY 526
GTDES FNSIL +RS+ QLR F EY
Sbjct: 238 GTDESKFNSILASRSFDQLRATFNEY 263
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -1
Query: 547 ETDLRRVRSFDRKDIEDSIKKEFSGSIEKGML-AIAKCVKSKVGFFAERLYYSMKGIGTN 371
E L+++ K E + ++ G + + A+ + LYY+MKG+GT
Sbjct: 75 EGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAVTSLLLPATQADVRSLYYAMKGLGTK 134
Query: 370 DKTLIRIVVSRSEIDLGDIKQAFL 299
+ LI + +RS + GD++ A L
Sbjct: 135 EAQLIETLCTRS--NTGDLRDALL 156
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 612 RSMGTDESIFNSILITRSYQQLRQIFAEYE 523
+ GTDES+F IL RS QLR ++ Y+
Sbjct: 416 KKWGTDESVFTKILTCRSDLQLRALYQAYQ 445
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 609 SMGTDESIFNSILITRSYQQLRQIFAEYEALT 514
S GTDE F + RS+ Q+ + AEY+ LT
Sbjct: 136 SWGTDEGAFIRVFTQRSFTQISAMCAEYKKLT 167
>SB_59650| Best HMM Match : Adap_comp_sub (HMM E-Value=0.01)
Length = 290
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 252 GVSSAIQVSRDLPYFSRNACLMSPRSIS 335
G++S +QV L YF+ C++ PRS++
Sbjct: 177 GINSYVQVFFKLSYFTMTGCVVDPRSLN 204
>SB_8827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 252 GVSSAIQVSRDLPYFSRNACLMSPRSIS 335
G++S +QV L YF+ C++ PRS++
Sbjct: 42 GINSYVQVFFKLSYFTMTGCVVDPRSLN 69
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 206 PSGDDNKPPISNTLSLISLFC*AFKISTRNV--TLEVTTVPTSKIG 75
PSG + + + LS SL AF+I T+NV TL+ T S G
Sbjct: 213 PSGTQQEVRVDSKLSAFSLLLQAFQIDTQNVLKTLQKQTPTASSAG 258
>SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 312 LMSPRSI--SERLTTMRMSVLSLVPMPFIE*YRRSAKKPTLLFTHLAIA-SMPFSMLPEN 482
L+SP+ + S +T ++ + ++ PFI R+ KP L +HL A +MP+ +N
Sbjct: 603 LVSPKLVLSSAMMTAIQYGRVQIIGKPFIPDAIRTTHKPLLSVSHLIRACAMPYLGRHDN 662
Query: 483 SFLIESS 503
I SS
Sbjct: 663 KNGISSS 669
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,321,726
Number of Sequences: 59808
Number of extensions: 370822
Number of successful extensions: 1025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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