Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40221
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    24   0.85 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.85 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
          protein protein.
          Length = 102

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +1

Query: 16 GSSSSPLRDTYR-RARY-GRAS 75
          GSSS PLR  YR R RY GR S
Sbjct: 34 GSSSLPLRSFYRSRIRYQGRIS 55


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = -1

Query: 259 PGIAGRGQCAADP----RHRPAHLNAGVICTMYLSRIR 158
           P +AG G+    P    RH PAHL AG  C + L  +R
Sbjct: 322 PQLAGGGRRGPGPARSRRHLPAHLVAGT-CFVQLIGMR 358


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 451 ENRHLDLPGNPVT 489
           E RHL L GNP+T
Sbjct: 514 ELRHLSLEGNPIT 526


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 448 IVFSMLRHFRRHPPCSRRFSASRK 377
           ++   ++ FR  P C R F ASR+
Sbjct: 227 VLLFFVKVFRPEPLCERLFEASRE 250


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = -1

Query: 202 LNAGVICTMYLSRIRNLTSVVSAIIFTQ------SLYEHLSQA-*ATNVWKRDRILRADR 44
           LN+G   T + S I N  S +  IIF         L E  S+   A + WK D+ L+   
Sbjct: 253 LNSGYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKNDKSLKRKF 312

Query: 43  Y 41
           Y
Sbjct: 313 Y 313


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 418 RHPPCSRRFSASRKLST 368
           R P C RRFS S  ++T
Sbjct: 51  RCPVCDRRFSQSSSVTT 67


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 418 RHPPCSRRFSASRKLST 368
           R P C RRFS S  ++T
Sbjct: 307 RCPVCDRRFSQSSSVTT 323


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 461 WRFSYCFQYAQTFPPTS 411
           WR +YC    Q  PP S
Sbjct: 79  WRSNYCDNKQQANPPIS 95


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 102 KCSYRDCVKMIAETTEVKL 158
           KC  + CVK + E  E  L
Sbjct: 47  KCENQKCVKYLVEDEETSL 65


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 485 TGLPGKSKWRFSYCFQYAQTFPPTSALQQTVLRL 384
           +G+  +S+     C++Y   F   S  ++ +LRL
Sbjct: 279 SGVHSESQKLVGVCYEYQDRFSDESKKRRELLRL 312


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 225 SAAHWPLPAIPGRIPI 272
           S A   LPA+PG +P+
Sbjct: 388 SKARQFLPALPGYVPV 403


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 225 SAAHWPLPAIPGRIPI 272
           S A   LPA+PG +P+
Sbjct: 213 SKARQFLPALPGYVPV 228


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -2

Query: 438  VCSDISADIRLAADGSPPLGNSAPKRLPPSRSFSLANARHSFDNKSKPSVLTS 280
            V  ++  + RL    S  +   A  R    RSF    A+   ++K   S LTS
Sbjct: 866  VKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSNGAKEEDEDKPSVSPLTS 918


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,319
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)