Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40217
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051645-1|AAK93069.1|  132|Drosophila melanogaster GM14307p pro...    42   0.001
AE014134-3260|AAF53906.2|  132|Drosophila melanogaster CG2611-PA...    42   0.001
AE014296-153|AAF47429.2|  341|Drosophila melanogaster CG34056-PA...    31   1.4  
AY119162-1|AAM51022.1|  170|Drosophila melanogaster RH22148p pro...    31   1.9  
AE014296-377|AAF47585.1|  170|Drosophila melanogaster CG12025-PA...    31   1.9  
AY075445-1|AAL68258.1|  831|Drosophila melanogaster RE05944p pro...    30   3.3  
AE013599-3187|AAF46714.2|  831|Drosophila melanogaster CG30394-P...    30   3.3  
AE013599-3186|AAF46715.2|  831|Drosophila melanogaster CG30394-P...    30   3.3  
AY118987-1|AAM50847.1|  479|Drosophila melanogaster LP02363p pro...    30   4.4  

>AY051645-1|AAK93069.1|  132|Drosophila melanogaster GM14307p
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 58  DDSGFSDAQFEAP--PPKIPWKAITLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPM 231
           +  GF + Q+  P  P  +PWK I +   LF+ G + +   +L        + SDR+W +
Sbjct: 36  ETDGFVNEQWTEPAMPGPVPWKTIIIILLLFIGGIVCIAFATLNWVTDTSRERSDRVWAL 95

Query: 232 IILGGIMF 255
            I+G + F
Sbjct: 96  GIIGALTF 103


>AE014134-3260|AAF53906.2|  132|Drosophila melanogaster CG2611-PA
           protein.
          Length = 132

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 58  DDSGFSDAQFEAP--PPKIPWKAITLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPM 231
           +  GF + Q+  P  P  +PWK I +   LF+ G + +   +L        + SDR+W +
Sbjct: 36  ETDGFVNEQWTEPAMPGPVPWKTIIIILLLFIGGIVCIAFATLNWVTDTSRERSDRVWAL 95

Query: 232 IILGGIMF 255
            I+G + F
Sbjct: 96  GIIGALTF 103


>AE014296-153|AAF47429.2|  341|Drosophila melanogaster CG34056-PA
           protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -2

Query: 187 SLSSFQL*EGLSRPKTEMQLMLWLSMESSVVVLQTERQRNH 65
           S S  QL EG S+  TE +L LWL  E+ V+ +     +NH
Sbjct: 34  STSITQLEEGASQLATEEELALWLHNETRVLCMVLTLPKNH 74


>AY119162-1|AAM51022.1|  170|Drosophila melanogaster RH22148p
           protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 255 LPGAYHIRIAYCAYKQYPGYSFTDIPEF 338
           +PGAYH+   + A K Y G+ F  +P F
Sbjct: 142 IPGAYHVVYIWLAAKGYRGFDFYHLPLF 169


>AE014296-377|AAF47585.1|  170|Drosophila melanogaster CG12025-PA
           protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 255 LPGAYHIRIAYCAYKQYPGYSFTDIPEF 338
           +PGAYH+   + A K Y G+ F  +P F
Sbjct: 142 IPGAYHVVYIWLAAKGYRGFDFYHLPLF 169


>AY075445-1|AAL68258.1|  831|Drosophila melanogaster RE05944p
           protein.
          Length = 831

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 124 TLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPMIILG 243
           TLA F+F+ G +L+I+G+      ID K S   + M+ +G
Sbjct: 371 TLAQFVFVSGFLLMILGTYANLSAIDEKSSGPEFDMVAIG 410


>AE013599-3187|AAF46714.2|  831|Drosophila melanogaster CG30394-PB,
           isoform B protein.
          Length = 831

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 124 TLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPMIILG 243
           TLA F+F+ G +L+I+G+      ID K S   + M+ +G
Sbjct: 371 TLAQFVFVSGFLLMILGTYANLSAIDEKSSGPEFDMVAIG 410


>AE013599-3186|AAF46715.2|  831|Drosophila melanogaster CG30394-PA,
           isoform A protein.
          Length = 831

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 124 TLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPMIILG 243
           TLA F+F+ G +L+I+G+      ID K S   + M+ +G
Sbjct: 371 TLAQFVFVSGFLLMILGTYANLSAIDEKSSGPEFDMVAIG 410


>AY118987-1|AAM50847.1|  479|Drosophila melanogaster LP02363p
           protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 124 TLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPMIILG 243
           TLA F+F+ G +L+I+G+      ID K S   + M+ +G
Sbjct: 19  TLAQFVFVSGFLLMILGTYANLSAIDEKSSGPDFDMVAIG 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,652,861
Number of Sequences: 53049
Number of extensions: 773135
Number of successful extensions: 1600
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)