Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40217
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88175-7|AAS19859.1|  168|Caenorhabditis elegans Hypothetical pr...    32   0.43 
U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z84574-2|CAB06542.1|  488|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AC017117-4|AAF16610.1|  247|Caenorhabditis elegans Hypothetical ...    28   7.0  
U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase prote...    28   9.2  
AL132949-2|CAB61069.1|  286|Caenorhabditis elegans Hypothetical ...    28   9.2  
AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase pro...    28   9.2  

>U88175-7|AAS19859.1|  168|Caenorhabditis elegans Hypothetical
           protein F21F3.7 protein.
          Length = 168

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 255 LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 341
           +PG YH+    C     PGYSF  +P F+
Sbjct: 139 IPGFYHVYYVTCTLCGRPGYSFDKLPTFN 167


>U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical
           protein C16B8.3 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 816 PMGIGLTPPLPQLTGKPGPQV-LGFGYFTGGPLP 718
           P+G G+TP +P   G P P V  G GY    P P
Sbjct: 24  PVGFGVTPIMPLPYGAPPPPVGAGVGYAPPPPRP 57


>Z84574-2|CAB06542.1|  488|Caenorhabditis elegans Hypothetical
           protein F33E2.3 protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 93  TTTEDSMESHNISCISVFGRDNPSYSWKLDSD-WS 194
           +T+E+  +S+    ISV    N SYSW++ SD WS
Sbjct: 97  STSENCEKSYKDVKISVPSEANGSYSWEVTSDIWS 131


>AC017117-4|AAF16610.1|  247|Caenorhabditis elegans Hypothetical
           protein F43C11.6 protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 112 WKAITLAAFLFLVGTILLIVGSLIVT 189
           W ++ L  FLFLV  ILL++G  I+T
Sbjct: 35  WFSMFLLDFLFLVSWILLLLGIFILT 60


>U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase protein
           5 protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 789 LPQLTGKPGPQVLGFGYFTGGPLPITN 709
           L QLT K   Q++G  YF G  LP  N
Sbjct: 47  LTQLTDKEVAQLIGSDYFNGSVLPCDN 73


>AL132949-2|CAB61069.1|  286|Caenorhabditis elegans Hypothetical
           protein Y53F4B.2 protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +1

Query: 235 ILGGIMFFLELIT*-G*RTAHISSIQDIVLQTFQNLISTSIS---LYLRFK*VTCNTNHL 402
           ++  IM+    IT  G R   I S+    LQT Q LI  SIS   LYL+     C  ++ 
Sbjct: 190 LVHSIMYTYYAITSIGYRLPKIVSMTVTFLQTLQMLIGVSISCIVLYLKLNGEMCQQSY- 248

Query: 403 PE*CS*FQLYISLSLFSDYLLFVASSFN 486
                   L +S  +++ +L+  +S FN
Sbjct: 249 ------DNLALSFGIYASFLVLFSSFFN 270


>AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase
           protein.
          Length = 674

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 789 LPQLTGKPGPQVLGFGYFTGGPLPITN 709
           L QLT K   Q++G  YF G  LP  N
Sbjct: 47  LTQLTDKEVAQLIGSDYFNGSVLPCDN 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,719,605
Number of Sequences: 27780
Number of extensions: 395268
Number of successful extensions: 853
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)