Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40216
         (831 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664...    30   2.2  
At4g26620.1 68417.m03836 sucrase-related                               28   8.7  

>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
           Protein of unknown function (DUF810)
          Length = 985

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 807 LFLYNIPSTFTALQ-VLSLIYHILHTYNKLVF 715
           LF  ++P   T LQ +LSLIYH L TY + VF
Sbjct: 598 LFGLHLPVDITHLQALLSLIYHSLDTYLQRVF 629


>At4g26620.1 68417.m03836 sucrase-related
          Length = 443

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -1

Query: 756 LIYHILHTYNKLVFFSTLEIPLEILYMAKQCLPGQLVLYKNELLFVSLAKSRERLDG 586
           LI+  +  Y +L  F       E+L    + LPG   L K   +FV    SR+R  G
Sbjct: 146 LIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGNPELLKGSYVFVCSHGSRDRRCG 202


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,870,285
Number of Sequences: 28952
Number of extensions: 304118
Number of successful extensions: 572
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)