Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40215
         (835 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   4.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 327 EMENFGGQDQIQKHRLLANMYLL 395
           ++ ++ G++ +  H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 327 EMENFGGQDQIQKHRLLANMYLL 395
           ++ ++ G++ +  H+LL N Y L
Sbjct: 250 DLPDYRGEEYLYSHKLLLNRYYL 272


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 555 INVNYSSLIKILCRDN 508
           I  N ++LIK LCRDN
Sbjct: 590 ITRNATALIKKLCRDN 605


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 388 ICWWCNSPTESSYCSRVTATL*KDYPRDL 474
           IC+ C   T +S   R+   L  DY RD+
Sbjct: 24  ICFVCKDITSTSALYRLKLYLFCDYDRDI 52


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 582 SSNYKESTWINVNYSSLIKI 523
           ++NYK+  + N+NY   I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 582 SSNYKESTWINVNYSSLIKI 523
           ++NYK+  + N+NY   I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 582 SSNYKESTWINVNYSSLIKI 523
           ++NYK+  + N+NY   I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 582 SSNYKESTWINVNYSSLIKI 523
           ++NYK+  + N+NY   I I
Sbjct: 104 NNNYKKLQYYNINYIEQIPI 123


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 241 PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSSASITLH 131
           PN++P S    +++      P  M  D W+S  + LH
Sbjct: 57  PNVRPISSHQIANNVTMQLLPKLMEFDDWTSV-MELH 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,973
Number of Sequences: 438
Number of extensions: 5195
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)