Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40214
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 688  KPSSKILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 566
            K   K++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1820 KSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 16  FEIGGLLSSPLGTLFIDKGQQSLLVI 93
           F++GG L+   GTL+   G  ++ VI
Sbjct: 361 FKVGGFLNIDYGTLYSLFGSTAMNVI 386


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 308 SQCYQRILS*SSPQCLFRSKLRTRRR 385
           SQ   R+L  S P C +  + ++RR+
Sbjct: 394 SQEESRVLDLSKPGCSYTGEQKSRRK 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,009
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)