BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV40214 (743 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 68 9e-12 08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 63 2e-10 06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 54 9e-08 05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 53 3e-07 01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 53 3e-07 02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 51 8e-07 07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 48 6e-06 09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 41 0.001 09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 33 0.32 05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 3.9 03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 3.9 02_02_0440 - 10273032-10273259,10273423-10273461,10273875-102741... 29 3.9 01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656... 29 3.9 03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 29 5.2 01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 29 5.2 07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 6.8 03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 28 6.8 >09_04_0008 + 13651997-13652072,13652440-13652541,13653138-13653142, 13653970-13654188,13654686-13654901,13654989-13655078, 13656307-13656507 Length = 302 Score = 67.7 bits (158), Expect = 9e-12 Identities = 33/59 (55%), Positives = 45/59 (76%) Frame = -3 Query: 240 SMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 SMKG+GT+D TLIR+VV+R+EID+ IK + +KY KSL I +TSG+Y+ LL+LV Sbjct: 241 SMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSLV 299 Score = 48.8 bits (111), Expect = 5e-06 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = -3 Query: 234 KGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 K +GT++KT IRI RS + + A+ Y +SLE + +TSG+++ ALLT++ Sbjct: 168 KRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTIL 224 Score = 35.1 bits (77), Expect = 0.059 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -3 Query: 198 IVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 I+ SR+ L +KQ + K+G LE I TSGD++K LL V Sbjct: 96 IICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYV 140 Score = 32.7 bits (71), Expect = 0.32 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = -1 Query: 449 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 291 GTD+S +++TR+ ++ I AEY K + ++I E SG+ +L++ Sbjct: 246 GTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298 Score = 29.5 bits (63), Expect = 2.9 Identities = 13/52 (25%), Positives = 28/52 (53%) Frame = -2 Query: 640 TISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIMKAQLKPM 485 ++++ Y +Y +SLE +K +TSG+F+ +++ + + K K M Sbjct: 191 SVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSM 242 Score = 29.1 bits (62), Expect = 3.9 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -2 Query: 676 KILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 542 +++ T + ++ I A Y + Y KSL + +TSG+++ +SL Sbjct: 254 RVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298 >08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 Length = 346 Score = 63.3 bits (147), Expect = 2e-10 Identities = 28/64 (43%), Positives = 45/64 (70%) Frame = -3 Query: 249 LYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLT 70 L+ +MKG+GTND TLIR+V +R+E+D+ IK + Y +SL + +TSG+Y+ LL+ Sbjct: 281 LHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLS 340 Query: 69 LVDK 58 L+ + Sbjct: 341 LIGR 344 Score = 32.3 bits (70), Expect = 0.42 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 228 IGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALL 73 +GT+++T IR+ RS + + A+ Y +SLE I + Y AL+ Sbjct: 188 LGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIYRSCTAAYALALV 239 Score = 29.1 bits (62), Expect = 3.9 Identities = 13/53 (24%), Positives = 29/53 (54%) Frame = -1 Query: 449 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 291 GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++ Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341 Score = 27.9 bits (59), Expect = 9.0 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 341 SIKKEFSGSIEKGMLAIAKCVKSKVGFFA 255 ++K E SG+ G+L I +C +S +FA Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFA 278 >06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310, 6262910-6263122,6264007-6264300 Length = 317 Score = 54.4 bits (125), Expect = 9e-08 Identities = 24/59 (40%), Positives = 42/59 (71%) Frame = -3 Query: 240 SMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 ++ G+GT++ +L RI+ +R+E+DL I +A+ ++ LE +A DTSGDY++ LL L+ Sbjct: 255 AIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYERMLLALL 313 Score = 41.9 bits (94), Expect = 5e-04 Identities = 19/60 (31%), Positives = 36/60 (60%) Frame = -3 Query: 252 RLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALL 73 +L + +G GTN+ +I I+ R I++A+ + YG+ L I D+ SGD+++A++ Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78 Score = 40.7 bits (91), Expect = 0.001 Identities = 17/54 (31%), Positives = 33/54 (61%) Frame = -3 Query: 225 GTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 G+ + L+ I +R L ++QA+ E++ +SLE +A +GD++K L+ L+ Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLI 155 Score = 37.5 bits (83), Expect = 0.011 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -1 Query: 452 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 297 WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++ Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78 Score = 30.7 bits (66), Expect = 1.3 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = -2 Query: 709 RNWNPTK--KPSSKILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCM 536 R W P + +I C + + Y + + +SLE D+ +G F++L V L Sbjct: 97 RKWYPGSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLIS 156 Query: 535 ANRDE 521 A R E Sbjct: 157 AYRYE 161 >05_04_0139 + 18355597-18355696,18356665-18356778,18357118-18357263, 18357365-18357910,18358397-18358600 Length = 369 Score = 52.8 bits (121), Expect = 3e-07 Identities = 26/65 (40%), Positives = 42/65 (64%) Frame = -3 Query: 240 SMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVD 61 S+ G+GT+++ L R +VSR+E+D+ +K+ + +Y ++ + DTSG Y LLTLV Sbjct: 307 SILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLTLV- 365 Query: 60 K*GPE 46 GPE Sbjct: 366 --GPE 368 Score = 35.1 bits (77), Expect = 0.059 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -1 Query: 452 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 297 WGTDE+ IL R+ Q +I YE L + + D + E SG ++ Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124 >01_05_0009 - 17101633-17101836,17101948-17102040,17102122-17102334, 17102514-17102651,17102764-17102909,17106264-17106339 Length = 289 Score = 52.8 bits (121), Expect = 3e-07 Identities = 26/59 (44%), Positives = 38/59 (64%) Frame = -3 Query: 240 SMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 +M GTN+ +L R++V +E DL IK AF ++ +LE I +DTSGDYK L+ L+ Sbjct: 227 AMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQKRASVALEKAIGNDTSGDYKSFLMALL 285 Score = 36.7 bits (81), Expect = 0.019 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -1 Query: 452 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 300 WGTDE +L R Q +QI YE +++ ++ E SG +E+ M Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77 Score = 31.1 bits (67), Expect = 0.97 Identities = 14/58 (24%), Positives = 31/58 (53%) Frame = -3 Query: 249 LYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKAL 76 L + +G GT+++ +I ++ R I+ + E Y ++L + + SGD ++A+ Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77 >02_05_0782 - 31716860-31717150,31717400-31717612,31718497-31718642, 31718742-31718817 Length = 241 Score = 51.2 bits (117), Expect = 8e-07 Identities = 23/59 (38%), Positives = 41/59 (69%) Frame = -3 Query: 240 SMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 ++ G+GT++ +L RI+ +R+E+DL IK+A+ ++ LE +A DT+ DY+ LL L+ Sbjct: 180 ALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYEDILLALL 238 Score = 38.7 bits (86), Expect = 0.005 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -3 Query: 252 RLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYK--KA 79 +L + KG GTN+K +I I+ R I++A+ E YG+ L + D+ G ++ Sbjct: 19 QLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLVP 78 Query: 78 LLTLVDK*GPE 46 L+T+ GPE Sbjct: 79 LVTVYRYDGPE 89 Score = 31.9 bits (69), Expect = 0.55 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = -1 Query: 452 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE 309 WGT+E + SIL R Q R I Y G+++ ++ E G E Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74 >07_03_1563 - 27746977-27747180,27747280-27747369,27747529-27747753, 27748002-27748115,27748218-27748423,27748757-27748832 Length = 304 Score = 48.4 bits (110), Expect = 6e-06 Identities = 23/62 (37%), Positives = 39/62 (62%) Frame = -3 Query: 243 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLV 64 +S+ G+GT + L R++VSR+EID+ I++ + +Y ++ + DTS YK LL LV Sbjct: 241 HSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRYKTTVTRDVVGDTSFGYKGFLLALV 300 Query: 63 DK 58 + Sbjct: 301 GR 302 Score = 31.5 bits (68), Expect = 0.73 Identities = 21/65 (32%), Positives = 27/65 (41%) Frame = -1 Query: 449 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSK 270 G DE + I+ TRS QLR F Y G DI + I G + + C+ S Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSP 231 Query: 269 VGFFA 255 FA Sbjct: 232 EKHFA 236 >09_04_0360 - 16944990-16945202,16945288-16945377,16945525-16945746, 16945854-16946081,16946163-16946372 Length = 320 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = -1 Query: 443 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 264 DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+ + Sbjct: 187 DEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCIYNPSM 246 Query: 263 FFA 255 +F+ Sbjct: 247 YFS 249 >09_03_0079 + 12142390-12142459,12142792-12143006,12143050-12143268, 12143345-12143932 Length = 363 Score = 32.7 bits (71), Expect = 0.32 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -3 Query: 207 LIRIVVSRSEIDLGDIKQAFLEKYGKSLETWIADDTSGDYKKALLTLVDK*G 52 L+ +V +R ++ I+QA+ +Y SLE ++ TSG + LL + G Sbjct: 127 LVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLAFLGSSG 178 >05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129, 6010765-6010857,6011370-6011675 Length = 510 Score = 29.1 bits (62), Expect = 3.9 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = -2 Query: 253 APVLLDEGHRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 128 AP+L H H H H E + G + +P +VR V Sbjct: 283 APLLQPHSHSHSHPHGHGHGHELAQPEGSGGEGEVPAQVRSV 324 >03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021, 5103670-5104577 Length = 538 Score = 29.1 bits (62), Expect = 3.9 Identities = 24/86 (27%), Positives = 40/86 (46%) Frame = -3 Query: 345 GLDQERILW*H*EGHARYCQMRKEQGRFLR*RLYYSMKGIGTNDKTLIRIVVSRSEIDLG 166 G +++ L H GH ++R+ G+ +R R+Y + T + SR+ DL Sbjct: 56 GFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYV------CPEPTCVHHDPSRALGDLT 109 Query: 165 DIKQAFLEKYGKSLETWIADDTSGDY 88 IK+ F K+G+ + W D S Y Sbjct: 110 GIKKHFCRKHGE--KKWKCDKCSKKY 133 >02_02_0440 - 10273032-10273259,10273423-10273461,10273875-10274123, 10274203-10274329,10275009-10275251,10275359-10275457, 10275566-10275681,10275813-10276039,10276164-10276276, 10276402-10276522,10276641-10276855,10277042-10277225, 10277739-10278048,10278155-10278249,10278473-10278485 Length = 792 Score = 29.1 bits (62), Expect = 3.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 137 YFSRNACLMSPRSISERLTTMRMSVLS 217 YF AC+ P SERL R+SVL+ Sbjct: 519 YFLAAACIFEPNRASERLAWARVSVLA 545 >01_05_0142 - 18564697-18564792,18564824-18564928,18565606-18565678, 18566262-18567637 Length = 549 Score = 29.1 bits (62), Expect = 3.9 Identities = 18/78 (23%), Positives = 38/78 (48%) Frame = -2 Query: 637 ISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIMKAQLKPMLKHWPPLVK 458 +SA + +L GK+++ DL G HF + +C A + Q + ++ ++ HW ++ Sbjct: 421 VSAIFAKL-GKNVDFDLNGR---HFLK---HVCHAMEEHYQSRINSECNSIVTHWRKMIN 473 Query: 457 VNGEPTNQSSTPSLSLAP 404 + PT+ ++ P Sbjct: 474 LLNFPTSVVKASLINAPP 491 >03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669, 7298723-7298835,7298924-7299034,7299480-7299597, 7299706-7299809,7300570-7300665,7301806-7302307 Length = 654 Score = 28.7 bits (61), Expect = 5.2 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2 Query: 229 HRHQRQDAHPHRGEPLRDRPRGHQAGIPREVRQV 128 H H R H HR + +R G AG ++ R+V Sbjct: 138 HSHHRHGGHHHRSDSVRGGGTGATAGSDKDGREV 171 >01_04_0018 + 15128174-15128316,15128445-15128544,15129573-15129758, 15129877-15129924,15130006-15130209,15130476-15130565, 15130667-15130747,15130827-15130889,15131794-15131832, 15131914-15132000,15132103-15132252,15132331-15132386, 15132493-15132775,15132989-15133132,15133233-15133451, 15133528-15133695,15133868-15133969 Length = 720 Score = 28.7 bits (61), Expect = 5.2 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Frame = -3 Query: 165 DIKQAFL----EKYGKSLETWIADDTSGDY--KKALLTLVDK 58 D +Q+FL + Y K +TWI +++ +Y K AL L+D+ Sbjct: 195 DFEQSFLNGTTDYYSKKAQTWILENSCPEYMLKAALFELIDR 236 >07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371, 18577344-18577458,18578179-18578333,18578673-18580621, 18580691-18581372,18581550-18581621,18582558-18583199, 18583301-18583402,18585011-18585100 Length = 2192 Score = 28.3 bits (60), Expect = 6.8 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 472 PPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 347 P ++K + P+ ++PS S A D S+PST PE+T+ Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047 >03_05_0078 + 20555296-20555560,20555643-20555887,20555947-20556180, 20556451-20556537,20556624-20556959,20557057-20557194, 20557231-20557311,20557392-20557480,20557750-20557813, 20557896-20557985,20558064-20558186 Length = 583 Score = 28.3 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 131 LPYFSRNACLMSPRSISERLTTMRMSVLSLVP 226 +PY NA +S S+ +R T +M+V S+VP Sbjct: 505 IPYERTNAKQLSEESLGKRSRTSQMNVKSMVP 536 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,384,475 Number of Sequences: 37544 Number of extensions: 427443 Number of successful extensions: 1355 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1278 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1355 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1968901276 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -