Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40214
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.99 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -2

Query: 229 HRHQRQDAHPHRGEPLRDRPRGHQAG 152
           H+H     HPHRG     +   H  G
Sbjct: 319 HQHHPSQYHPHRGSSPHHQHGNHTMG 344


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 644 PYHIRILRTTVRQEPGIGLKRRHVGTLQEIVRVVVHGQ 531
           PY   +L++T  + P I L+      L  +V  + HG+
Sbjct: 55  PYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGE 92


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 689 EAIIEDPVHAFQLWYPY 639
           E+ I   +HA QL+YP+
Sbjct: 258 ESNIASVLHALQLYYPH 274


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 689 EAIIEDPVHAFQLWYPY 639
           E+ I   +HA QL+YP+
Sbjct: 273 ESNIASVLHALQLYYPH 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,104
Number of Sequences: 438
Number of extensions: 4060
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)