Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40213
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    47   2e-07
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    26   0.31 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.41 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +2

Query: 98  LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNA 241
           L  T VA+RGLDI  V  ++ +D P   +EY+HR+GR  R +G  G A
Sbjct: 463 LVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGR-VGNKGKA 509


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 300 YFRFLQVIHKTHFLRFRSKTALPSAPKPLAG 208
           Y+++LQ     H L+FR     P  PK +AG
Sbjct: 42  YYQYLQNAALYHKLQFRGPPRTPLQPKLVAG 72


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -1

Query: 254 LEVKLHYHQHPNLSPVCPLCECIHLHHQVDQTGLSNLQPGYPILL 120
           +E  +  ++H  L  V PLC+   LHH++ +  +  L   Y ++L
Sbjct: 196 IEESISKYKHAEL--VMPLCKSCDLHHRLSKL-IKQLNATYGLIL 237


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 364 LPYPTFFVNYNKNPSFRIYLHIF*IPSGNPQNPLPQV 254
           L YP++   YN++ S   Y +   I   NP++P PQ+
Sbjct: 359 LTYPSY---YNQDVSCTHYQNPEYISVVNPESPYPQI 392


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 126  PLDATSVQNKGYIFWFHRIY 67
            P+D TS  +   I W H +Y
Sbjct: 978  PIDYTSAFSSEKIVWLHLVY 997


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 193 NVFICITRWIKLDYPIY 143
           N+F  +  W +L YPIY
Sbjct: 61  NIFKQLREWGRLYYPIY 77


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 119 TQHLYRIKAIFSGFIEFIDGW 57
           T  LY+I  +FS  + F   W
Sbjct: 29  TYRLYKIFVVFSFAVTFFSAW 49


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 193 NVFICITRWIKLDYPIY 143
           N+F  +  W +L YPIY
Sbjct: 61  NIFKQLREWGRLYYPIY 77


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 274 VDYLKESKIYVDKYESWDSYYNLQKK---LDTAMSDSNF 381
           V+Y     +      +WD + N+Q++   +D + + SN+
Sbjct: 532 VEYCSRGDLQTYLRTAWDKFTNMQQQFAYIDESSNSSNY 570


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 318 FVFIYIYFRFLQVIHKTHFLRF 253
           F+F+ I   +L++ HK  + +F
Sbjct: 16  FLFLLICDSYLKIYHKEKYRKF 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,049
Number of Sequences: 336
Number of extensions: 4081
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)