Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40213
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 83 2e-16
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 54 9e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 54 9e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 54 9e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 52 3e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 6e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 6e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 8e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 50 1e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 50 1e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 50 1e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 50 2e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 49 3e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 48 6e-06
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 46 3e-05
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 46 3e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 46 3e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 44 1e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 44 1e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 1e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 41 9e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 41 9e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 9e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 39 0.003
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 39 0.003
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 36 0.033
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 0.31
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 0.31
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 0.31
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 32 0.31
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 32 0.41
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 32 0.41
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 6.7
Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L CTDVA+RGLDIPAVDWIVQ+DP + EYIHRVGR ARG G A+L+L
Sbjct: 368 LLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVL 419
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 KPEEVGFVDYLKESKIYVDKYE-SWDSYYNLQKKLDTAMSDSNFVNL-AIEAFEGYVRAL 426
+PEE+GF+ YLK +K+ ++++E SW N+Q +L+ +S + ++N A EA++ Y+RA
Sbjct: 420 RPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKSAKEAYKCYLRAY 479
Query: 427 EVRKLKQIFNLLTMDLDVLARSFG 498
+ LK IF++ MDL +++SFG
Sbjct: 480 DSHSLKDIFDVTNMDLTAVSKSFG 503
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L CTDVA+RGLDIP VD ++ +D P + +Y+HRVGR AR G G A+ ++
Sbjct: 337 LVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARA-GRSGIAITVV 387
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L TDVASRGLD +DW++Q D P ++YIHRVGR AR + GN++L+++
Sbjct: 376 LIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSAR-MDDSGNSLLMVS 427
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 250 SKPEEVGFVDYLKESKIYVDKYESW-DSYYNLQKKLDTAMSDSNFVN-LAIEAFEGYVRA 423
S +E + L++ I +++ + D+ +++ KL +++S + A ++ Y+R+
Sbjct: 427 SPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEYAQKSIVAYLRS 486
Query: 424 LEVRKLKQIFNLLTMDLDVLARSFGL 501
+ K K++F++ +D LA SFGL
Sbjct: 487 IYTMKDKKVFDVEAIDAAALADSFGL 512
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
+ TDV +RG+DI +DW++QFD P ++ ++HR GR AR G +GNA++L+
Sbjct: 313 MISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTAR-CGREGNALILI 363
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
+ CTDVASRGLDIP VD +V + P YIHRVGR AR G G+A+
Sbjct: 391 IICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARA-GRFGSAL 438
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
+ CTDVASRGLDIP VD +V + P YIHRVGR AR G G+A+
Sbjct: 391 IICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARA-GRFGSAL 438
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L T VA+RGLDIP V ++ +D PGD++EY+HR+GR R
Sbjct: 452 LVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR 491
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L T VA+RGLDIP V ++ +D PGD++EY+HR+GR R
Sbjct: 436 LVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR 475
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L T VA+RGLDIP V ++ +D PGD++EY+HR+GR R
Sbjct: 433 LVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR 472
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L TD+ASRG+D+P + ++ +D P D EY+HRVGR R G G A+ L
Sbjct: 392 LVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRA-GRKGEAMSFL 442
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA+RGLDIP V ++ +D P D +EY+HR+GR R +G G A N
Sbjct: 481 LVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGR-VGNVGLATSFFN 532
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L TDVAS+GLD ++ ++ FD P D Y+HR+GR R G G A +N
Sbjct: 495 LVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRS-GRKGLATTFIN 546
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLNL 259
L T V RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++L
Sbjct: 617 LIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGR-VGNSGRATSFISL 669
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLNL 259
L T V RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++L
Sbjct: 617 LIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGR-VGNSGRATSFISL 669
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 660 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNSGRATSFIS 711
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 660 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNSGRATSFIS 711
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 660 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNSGRATSFIS 711
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 871 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNAGRATSFIS 922
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 871 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNAGRATSFIS 922
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L T VA RGLDI VD ++ +D P + ++YIHR+GR R +G G A ++
Sbjct: 871 LIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR-VGNAGRATSFIS 922
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L TDVA+RG+DIP +D ++ P A ++HRVGR AR G G A+ L+
Sbjct: 319 LVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARA-GRSGTAISLI 369
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L TDVA+RG+DIP +D ++ P A ++HRVGR AR G G A+ L+
Sbjct: 319 LVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARA-GRSGTAISLI 369
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L C+D+ +RG+DI AV+ ++ FD P +A Y+HR+GR R G G A+ L+
Sbjct: 334 LVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGR-FGHLGVAINLI 384
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L TD+ASRGLDI V ++ + P +YIHRVGR AR G G ++ L+
Sbjct: 471 LVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARA-GKAGRSISLV 521
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 48.4 bits (110), Expect = 4e-06
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
+ TDVA+RGLD+ + +++ +D P ++ +Y+HR+GR R
Sbjct: 430 MLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGR 469
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L TDV +RGLD+P V ++ +D P + YIHR+GR R G G A+
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGR-FGRKGVAI 366
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L TDV +RGLD+P V ++ +D P + YIHR+GR R G G A+
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGR-FGRKGVAI 366
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLNLRK-WVL 274
L TDVA+RGLDI + ++ FD D + ++HR+GR R G G A L+ + ++
Sbjct: 564 LVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRA-GHKGTAYTLVTEKDIEMV 622
Query: 275 WIT*RNLKYM*INTKAGILIIIYKKSWIR 361
+NL+ + ++ + K SW R
Sbjct: 623 GHLVKNLESVSQEVPKPLMDLAMKSSWFR 651
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L CT++ RGLD+ V ++ +D P YIHRVGR R G G+AV
Sbjct: 429 LVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRA-GKSGHAV 476
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L TDVA+RGLDI +D ++ + P YIHR GR AR
Sbjct: 327 LLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTAR 366
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L TDVA+RGLDI +D ++ + P YIHR GR AR
Sbjct: 494 LLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTAR 533
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L TD+ +RG+D+ V ++ +D P + YIHR+GR R G G A+
Sbjct: 322 LITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR-FGRKGVAI 369
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L TD+ +RG+D+ V ++ +D P + YIHR+GR R G G A+
Sbjct: 35 LITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR-FGRKGVAI 82
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L TD+ +RG+D+ V ++ +D P + YIHR+GR R G G A+
Sbjct: 322 LITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR-FGRKGVAI 369
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAV 244
L C+DV +RG D+ VD ++ ++ P D ++HR GR R G DG +
Sbjct: 453 LICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRA-GQDGYVI 500
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L TD+ RG+DI V+ + +D P D++ Y+HRV R R G G A+ ++
Sbjct: 337 LVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR-FGTKGLAITFVS 388
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L TDVA RG+D+ V ++ +D +Y HR+GR R G G A+ L
Sbjct: 627 LVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRA-GKHGKAITFL 677
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
L TD+ RG+DI V+ + +D P D++ Y+HRV R R G G A+ ++
Sbjct: 329 LVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR-FGTKGLAITFVS 380
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L +D+ +RG+D V+ +V D + Y HR+GR AR GA G AV LL
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR-FGAHGAAVTLL 363
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
L +D+ +RG+D V+ +V D + Y HR+GR AR GA G AV LL
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR-FGAHGAAVTLL 363
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L C+DV +RGLD+ V +++ P + + Y+HR+GR R
Sbjct: 559 LVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGR 598
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNA 241
L T VA+RGLD+ + +V +D P +Y+HRVGR R G G A
Sbjct: 606 LVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRA-GRKGYA 652
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 104 CTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLLN 256
CT++ SRG+D+ +V + + D Y+HR+GR R G G A +L++
Sbjct: 430 CTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRD-GCGGRATVLID 479
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 119 SRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARG 220
SRG+D V +V FD P + YIHRVGR ARG
Sbjct: 369 SRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARG 402
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 119 SRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARG 220
SRG+D V +V FD P + YIHRVGR ARG
Sbjct: 436 SRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARG 469
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFD-PPGD----ANEYIHRVGRPAR 217
L TD+ SRG+D+ +D ++ FD P GD A+ +IHR GR R
Sbjct: 700 LVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGR 744
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 83 QKI*PLFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPARGLGADGNAVLLL 253
+KI + CT++ +RG+D+ +V + + D + Y HR+GR R G G + +L+
Sbjct: 425 RKIHGVVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRD-GCGGKSTVLV 480
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 83 QKI*PLFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGR 208
+KI + CT++ +RG+D+ +V + + D + Y HR+GR
Sbjct: 272 RKIHGVVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGR 313
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 DKYESWDSY-YNLQKKLDTAMSDSNFVNLAIEAFEGYVRALEVRKLKQIFNLLTM 468
DK E WDS + L+ K+ + SD+N L I +FE R + K+K++ L +
Sbjct: 1797 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFES-ERQILTEKIKELDGALRL 1850
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 DKYESWDSY-YNLQKKLDTAMSDSNFVNLAIEAFEGYVRALEVRKLKQIFNLLTM 468
DK E WDS + L+ K+ + SD+N L I +FE R + K+K++ L +
Sbjct: 1870 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFES-ERQILTEKIKELDGALRL 1923
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 DKYESWDSY-YNLQKKLDTAMSDSNFVNLAIEAFEGYVRALEVRKLKQIFNLLTM 468
DK E WDS + L+ K+ + SD+N L I +FE R + K+K++ L +
Sbjct: 1870 DKEEQWDSSRFQLETKMRESDSDTNKYQLQIASFES-ERQILTEKIKELDGALRL 1923
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 98 LFCTDVASRGLDIPAVDWIVQFDPPGDANEYIHRVGRPAR 217
L T V G+D+ + +++FD P D Y+ GR R
Sbjct: 457 LIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARR 496
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 622 PSHHDLAFFVSLWEAKIAAILFL 554
P+ H+LAFF LWE K A +FL
Sbjct: 42 PTDHELAFFPELWEHKTAVEVFL 64
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 622 PSHHDLAFFVSLWEAKIAAILFL 554
P+ H+LAFF LWE K A +FL
Sbjct: 42 PTDHELAFFPELWEHKTAVEVFL 64
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 497 PKDLAKTSRSIV-NKLNICFSFLTSSALTYPSNASIAKFTKLE 372
P AKTS S+ NK+ S +SS+ P++ S+ +FT L+
Sbjct: 799 PPKKAKTSNSVPPNKMVSAASTPSSSSTPGPASTSVGRFTNLK 841
>Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical
protein F10A3.7 protein.
Length = 214
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 315 VFIYIYFRFLQVIHKTHFLRFRSKTA 238
+ I+ Y+R+L V + LRF +KTA
Sbjct: 112 ITIHFYYRYLSVTSPSGLLRFSNKTA 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,073,186
Number of Sequences: 27780
Number of extensions: 352660
Number of successful extensions: 930
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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