Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40212
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.1  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 301 RRRYTKPNRRSLSKHRVCSCELLMKDK 221
           +R Y  PN     K R+ SC+L  K K
Sbjct: 153 KREYYWPNMYRTIKKRLRSCDLCQKTK 179


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 417 LFAFIYFRNKISLRHYLLLNQYYLIFISLYCFSYIFITSVAF 542
           +++  + RN+I ++  L+    +    SLYCF+Y  I    F
Sbjct: 51  IYSKSFHRNEIHIKIVLM----FFKEASLYCFNYYVIVVTTF 88


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 466 FYSINITLYSSVCTVSHTFLSRV*HLKLLPWKKEEGPSVL 585
           F+SI+  L  S+C  S ++L  +  L  L  KK E  ++L
Sbjct: 412 FFSIDNALLLSICGASSSYLFIMIQLD-LGNKKNETSTIL 450


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/42 (19%), Positives = 21/42 (50%)
 Frame = +3

Query: 417 LFAFIYFRNKISLRHYLLLNQYYLIFISLYCFSYIFITSVAF 542
           ++ FI+ R++      L++   + +F   +CF ++ +    F
Sbjct: 297 MYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/42 (19%), Positives = 21/42 (50%)
 Frame = +3

Query: 417 LFAFIYFRNKISLRHYLLLNQYYLIFISLYCFSYIFITSVAF 542
           ++ FI+ R++      L++   + +F   +CF ++ +    F
Sbjct: 253 MYLFIHIRSRQEDTDTLVVIYTFNLFYLCFCFYWLLVMVAMF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,644
Number of Sequences: 336
Number of extensions: 2959
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)