Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40212
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    33   0.18 
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z50045-2|CAA90363.2|  485|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL031633-16|CAA21028.1|  374|Caenorhabditis elegans Hypothetical...    29   3.0  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
            protein F31B12.1c protein.
          Length = 1895

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 200  RWKTGSLFVLHKQLATTHAMLRKGPPIRFCIASSLSYRLVAL 325
            RWK+   FVL  +  T HA L KG  +    +SS + R ++L
Sbjct: 1828 RWKSMGRFVLENRKDTVHATLEKGRRVESTTSSSTTTRKISL 1869


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
            F31B12.1c protein.
          Length = 1895

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 200  RWKTGSLFVLHKQLATTHAMLRKGPPIRFCIASSLSYRLVAL 325
            RWK+   FVL  +  T HA L KG  +    +SS + R ++L
Sbjct: 1828 RWKSMGRFVLENRKDTVHATLEKGRRVESTTSSSTTTRKISL 1869


>Z50045-2|CAA90363.2|  485|Caenorhabditis elegans Hypothetical
           protein F38B2.3 protein.
          Length = 485

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 44  GSINWPCLICLDFMSVPHLASARQTFWWKPISNRELVALRN 166
           G  +W  LIC+ F++VP +A        K  ++R+L +L N
Sbjct: 410 GETHWIVLICVAFLTVPMIAGVIYFVIRKKENHRQLESLHN 450


>AL031633-16|CAA21028.1|  374|Caenorhabditis elegans Hypothetical
           protein Y39A1A.16 protein.
          Length = 374

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -3

Query: 227 GQTATLSSIAMR*LLNKLNFNYAELLIHDLILASTKKSALQRP 99
           G+ + +S+  M+ LLNK+N NY  L+  +L+ +   ++ L+ P
Sbjct: 199 GRDSNISTEEMQFLLNKINVNYGMLVRCELLGSMNNEAMLKIP 241


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +3

Query: 414 VLFAFIYFRNK---ISLRHYLLLNQYYLIFISLYCFSYIFITSV 536
           V F+F+   ++   +S RH   L  Y+  F   +CF+++F T +
Sbjct: 102 VRFSFLSLHSQHENVSKRHLAPLGIYFRFFFLRHCFAFLFFTEM 145


>AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical
           protein C16C4.6 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 419 VCIHLFQKQNFIKALPFTQSILPYI--HQFVLFLIHFYHECSI*NCYRGKRK 568
           +CI L +++N   +  F      ++   QF++F ++ Y    I NC    RK
Sbjct: 283 ICIELKRRENLEDSWSFAFQFCFFVTLQQFIMFNVYIYLRKHIKNCSNNLRK 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,878,644
Number of Sequences: 27780
Number of extensions: 275306
Number of successful extensions: 681
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)