Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40211
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    27   0.18 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.75 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.2  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 380 VKAVLNISQVVARKMIE----NKTHGAIVNISSQXSKAALKDHTIYSLQKLLWM 529
           ++A++N S+ V R   E    NK    +VN+     K A   +++YSL  LLW+
Sbjct: 207 IQALINDSRKVTRFPTELTFCNKIKH-LVNLHKNLVKVAKDHNSLYSLHLLLWI 259


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 660 ISIGLLSESAQPIFGHPSHYHSRIDAFTLIPYG 562
           + I L+ E  QP   HP H H    AF +I  G
Sbjct: 580 VEIVLVDEVQQPNLSHPFHLHGY--AFNVIGIG 610


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 82  LPLKDISIFSYTECPENY 29
           LP + + +F+  ECP NY
Sbjct: 496 LPGETLRLFTCMECPNNY 513


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 82  LPLKDISIFSYTECPENY 29
           LP + + +F+  ECP NY
Sbjct: 503 LPGETLRLFTCMECPNNY 520


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 91  SLPVPGKVSAEELRLNCGVQV 153
           S P P + + EEL   CG+ V
Sbjct: 254 SNPYPSEEAKEELARKCGITV 274


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 164 NYICTCTPQF 135
           +YICTC P F
Sbjct: 44  SYICTCKPGF 53


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 660 ISIGLLSESAQPIFGHPSHYHSRIDAFTLIPYG 562
           + + L+ E   P   HP H H    AF ++  G
Sbjct: 580 VEVVLVDEVQSPNLSHPFHLHGY--AFNVVGIG 610


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 544 YGFRTRTIWDQSKCINP 594
           Y    RTIW +SK + P
Sbjct: 226 YAVIVRTIWSKSKLLIP 242


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/41 (24%), Positives = 15/41 (36%)
 Frame = -1

Query: 374 HQTFCQSCSANSPKMVHIQQQLRCSPTHQSDLKIQQPSSSL 252
           HQ   QS +  +P           SP H S      P++ +
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARM 60


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/41 (24%), Positives = 15/41 (36%)
 Frame = -1

Query: 374 HQTFCQSCSANSPKMVHIQQQLRCSPTHQSDLKIQQPSSSL 252
           HQ   QS +  +P           SP H S      P++ +
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARM 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,241
Number of Sequences: 336
Number of extensions: 2783
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)