Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40211
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 71 9e-13
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 71 9e-13
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 46 2e-05
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 43 2e-04
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 42 5e-04
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 40 0.001
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 39 0.004
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 36 0.030
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 34 0.091
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 31 0.64
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 30 1.5
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
+K++ES FD LVNNA A+ E FL+ P +FD+ + NV+A L I+Q VA+KM+
Sbjct: 18 QKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIAQAVAKKMVAKGE 77
Query: 440 HGAIVNISS 466
GAIVN+SS
Sbjct: 78 GGAIVNVSS 86
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 70.9 bits (166), Expect = 9e-13
Identities = 48/135 (35%), Positives = 66/135 (48%)
Frame = +2
Query: 263 KVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTH 442
K+++ LG D LVNNA PFLD + + K F V+V SQ+ AR+M++
Sbjct: 109 KLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQG 168
Query: 443 GAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNASILL***LGWPK 622
G I+NI+S L D + Y+ K + MALEL + I VNA + + P
Sbjct: 169 GRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNA--VAPGAIATPM 226
Query: 623 MGWADSDKSPMEMPS 667
G DSD P PS
Sbjct: 227 NGMDDSDVKPDAEPS 241
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%)
Frame = +2
Query: 293 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQX 472
A+VNNA + PF + + FDVNV +LN+++ A + K+ G IVN++S
Sbjct: 627 AIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTK--AFLPLLKKSCGRIVNVASCA 684
Query: 473 SKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
K + YS K + + +E+ P+G+ V+
Sbjct: 685 GKLPGPGLSAYSASKYAVQSFSDALRIEMRPFGVSVH 721
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 45.2 bits (102), Expect = 5e-05
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +2
Query: 263 KVVESLGHFDALVNNAAVAV-CEPFLDCSPSN-FDKTFDVNVKAVLNISQVVARKMIENK 436
++VE G D LVNNA + + C P +C+ ++ +K F+ NV ++ ++ V M + +
Sbjct: 108 EIVEKEGRIDVLVNNAGIGLFCVP--ECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQR 165
Query: 437 THGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIK 577
G +VNI S IY K E MA LG + IK
Sbjct: 166 A-GHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLGKFNIK 211
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 266 VVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG 445
V + G+ L+NNA V + FL+CS S+ +TF VN A + Q M+E K G
Sbjct: 106 VEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTIQRFIPSMME-KNRG 164
Query: 446 AIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALE---LGPYGIK 577
IV+I+S L Y K + +E + E LG GI+
Sbjct: 165 HIVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREIHGLGKMGIE 211
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 41.9 bits (94), Expect = 5e-04
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 266 VVESLGHFDALVNNAA-VAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTH 442
V +S G D ++NNA V P + + FDK DVN+K N+ + KMI+
Sbjct: 73 VCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRSFLPKMIK-AGK 131
Query: 443 GAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGP 565
G IVN SS KA Y K +A+EL P
Sbjct: 132 GVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMELPP 172
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 TRKVVESLGHFDALVNNAAVAVCEP-FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIEN 433
+++V+ G L+NN+ V F + F+K D+N+K N+ + MIE
Sbjct: 75 SQQVMLDFGAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEA 134
Query: 434 KTHGAIVNISSQXSKAALKDHTIYSLQKLLWML 532
K G IVN +S + + Y K W L
Sbjct: 135 KRKGVIVNFTSGWGRCVAPEVAPYCTTK--WAL 165
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
+K + D L N A + + +CS +D T D+NVK++ +++ KM +
Sbjct: 76 KKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKM-RQQG 134
Query: 440 HGAIVNISSQXSK-AALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
G+I+N++S S + Y K + + +A + GI+VNA
Sbjct: 135 SGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIRVNA 184
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/105 (23%), Positives = 49/105 (46%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA 448
V + G D LVNNA+ ++K VN+ +SQ + ++HG+
Sbjct: 88 VTAFGQLDLLVNNASQFCPTESGSVQEETWNKLMGVNLSFPFFLSQAAFPHL--KRSHGS 145
Query: 449 IVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
I+N+ ++ L +H++Y + K + + +A + P ++VN
Sbjct: 146 IINMIDIHAERPLANHSVYCVSKAGLHMCTQALAKDFAP-DVRVN 189
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 35.9 bits (79), Expect = 0.030
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTF-DVNVKAVLNISQVVARKMIENK 436
R V++ D L+NN+ + ++ +K D+N AV+++++ V MIE K
Sbjct: 121 RSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERK 180
Query: 437 THGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKV 580
+G IV SS K T Y+ K + + +EL P I V
Sbjct: 181 -NGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGLRVELFPKNIHV 227
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 35.5 bits (78), Expect = 0.039
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 335 LDCSPSNFDKTFDVNVKAVLNISQVVARKM---IENKTHGAIVNISSQXSKAALKDHTIY 505
LD ++ KT VNV+ N+ Q M GA+VN++S + A H Y
Sbjct: 142 LDVEEKDWHKTMSVNVQGYANMVQACHPYMKTACNTGPSGAVVNLASISAHRAQPVHWTY 201
Query: 506 SLQKLLWML*LETMALELGPYGIKVNA 586
S K + + MAL+L I+VN+
Sbjct: 202 SSSKGAIISMTKCMALDLAKDHIRVNS 228
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 34.3 bits (75), Expect = 0.091
Identities = 25/97 (25%), Positives = 46/97 (47%)
Frame = +2
Query: 293 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQX 472
AL NNA C P S++ + DVN+ V+++S+ + G +VNISS
Sbjct: 258 ALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFL--PLVKMARGRVVNISSIY 315
Query: 473 SKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
+ + Y++ K ++M E+ +G++V+
Sbjct: 316 GFFSPIFGSHYAITKYGVEAFSDSMRREMARWGVRVS 352
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXS 475
LVNNA V + P + + + +VN+ + +++ + K G +VNISS
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVNISSVAG 98
Query: 476 KAALKDHTIYSLQKLLWML*LETMALELGPYGIKV 580
L+ + Y + K + + + E+ P+G+ V
Sbjct: 99 MVPLQRSSAYCISKFGVSVFSDALRREMSPWGVGV 133
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +2
Query: 350 SNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXSKAALKDHTIYSLQKLLWM 529
S + K DVN+ +++++ + K G +VNISS + ++ + YS+ K
Sbjct: 11 SEYKKMADVNLWGLIDVTLTFLPLI--RKCGGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 530 L*LETMALELGPYGIKV 580
+ + E+ P+G+KV
Sbjct: 69 AFSDALRREVSPWGVKV 85
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Frame = +2
Query: 266 VVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA-----VLNISQVV-----A 415
V +G LVNNA + + FLD KT +VN A LN +V
Sbjct: 124 VKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTV 183
Query: 416 RKMIEN---KTHGAIVNISS 466
+ + + K HG +VNI+S
Sbjct: 184 KSFLPSMLAKNHGHVVNIAS 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,256,698
Number of Sequences: 59808
Number of extensions: 351326
Number of successful extensions: 957
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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