Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40211
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   6.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   8.8  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   8.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.8  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +2

Query: 368 FDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXSKAAL 487
           FD+    ++N+SQ   RK    +  GA+  +    SK  L
Sbjct: 268 FDLLFDRIVNVSQANMRKFNSWQMMGALCRVHRPMSKVLL 307


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +1

Query: 436 NSWCHC--QHLISGIKGCSERPHHLQSSKAALDALTRDY 546
           + W H     L++GI   +++  HL S    +DAL  DY
Sbjct: 277 DGWLHMAGDGLLAGIVEENDKQCHLDSDGNFVDALKYDY 315


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 573 SK*MHQSYCDNDWDGQRWVG 632
           S+ +H   C N WDG  W+G
Sbjct: 917 SQTLHIPECPNGWDG-LWIG 935


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 660 ISIGLLSESAQPIFGHPSHYH 598
           + + L+ E  QP   HP H H
Sbjct: 622 VEVVLVDEVQQPNLSHPFHLH 642


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +1

Query: 13  ICINCNNFQDIQYN*KWKYLLKAKEFSLPVPGKVSAEELRLNCGVQVQI*LHCHELVRT* 192
           IC    +F D QY  KW   +K    S+ +P +  AE     C   ++   +  +  R  
Sbjct: 139 ICSIDGDFNDTQYEGKWS-AVKRMLLSVRLPPEDGAECATQPCSALLKACRYAKQPERCS 197

Query: 193 KVFR 204
           ++F+
Sbjct: 198 EIFQ 201


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 171 SRTRSHLESLQSEYPSIDIVDVDIGDWERRGRLLNL*VTLMRW*TTQLLL 320
           +R  S ++SLQ EY   + + ++ GD   +G +     TL+RW  T   L
Sbjct: 85  ARVVSRVKSLQQEYADRNPIYLNAGD-SFQGTIW---YTLLRWNVTAYFL 130


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 43   IQYN*KWKYLLKAKEFSLPVPGKVSA 120
            I+Y  K  YLL  K F L + G VSA
Sbjct: 2286 IEYAVKQFYLLNRKPFILQMFGSVSA 2311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,653
Number of Sequences: 2352
Number of extensions: 12995
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)