Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40211
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 71 6e-13
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 71 6e-13
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 59 2e-09
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 59 3e-09
AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical ... 48 5e-06
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 47 1e-05
Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical p... 46 2e-05
AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical p... 43 2e-04
AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 40 0.002
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81581-10|CAN86611.1| 309|Caenorhabditis elegans Hypothetical p... 38 0.005
Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF016668-1|AAB66092.1| 257|Caenorhabditis elegans Dehydrogenase... 38 0.005
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 38 0.005
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 38 0.005
U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,... 35 0.046
Z81592-12|CAB04734.1| 260|Caenorhabditis elegans Hypothetical p... 34 0.080
Z79696-3|CAB01974.1| 260|Caenorhabditis elegans Hypothetical pr... 34 0.080
AF016685-15|AAG24139.2| 321|Caenorhabditis elegans Hypothetical... 32 0.32
U41018-4|AAA82327.2| 321|Caenorhabditis elegans Dehydrogenases,... 29 4.0
Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 28 6.9
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 28 6.9
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 71.3 bits (167), Expect = 6e-13
Identities = 41/117 (35%), Positives = 62/117 (52%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXS 475
LVNNA +A + + D+TF VNV+ + I+Q+VAR ++ + G+IVNISSQ +
Sbjct: 87 LVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAA 146
Query: 476 KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNASILL***LGWPKMGWADSDK 646
L +HT+Y K + +A ELG I+VN+ + W+D DK
Sbjct: 147 IRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDK 203
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 FKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIVDVDI-GD 248
F KRILVT L +AGA ++A +R ++L SL E S+ + I GD
Sbjct: 7 FTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSLRYTIIPIVGD 66
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 71.3 bits (167), Expect = 6e-13
Identities = 41/117 (35%), Positives = 62/117 (52%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXS 475
LVNNA +A + + D+TF VNV+ + I+Q+VAR ++ + G+IVNISSQ +
Sbjct: 87 LVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAA 146
Query: 476 KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNASILL***LGWPKMGWADSDK 646
L +HT+Y K + +A ELG I+VN+ + W+D DK
Sbjct: 147 IRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDK 203
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 FKGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIVDVDI-GD 248
F KRILVT L +AGA ++A +R ++L SL E S+ + I GD
Sbjct: 7 FTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSLRYTIIPIVGD 66
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/106 (29%), Positives = 55/106 (51%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA 448
V+ G D L+N+A + P LD +D+ +VNV++++ +++ +I K G
Sbjct: 76 VQKFGRIDTLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHIITTK--GT 133
Query: 449 IVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
+VN+SS + T Y + K + +ALE+ P G++VNA
Sbjct: 134 VVNVSSINGPCPFPNVTYYCMSKSAVDQFTKCLALEMAPNGVRVNA 179
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/106 (29%), Positives = 55/106 (51%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA 448
V+ G D+L+N+A + P LD +D+ +VNV++++ +++ +I K G
Sbjct: 77 VQKFGRIDSLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHIITTK--GT 134
Query: 449 IVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
+VN+SS T Y + K + +ALE+ P G++VNA
Sbjct: 135 VVNVSSINGPCPFAGVTYYCMSKSAVDQFTKCLALEMAPNGVRVNA 180
>AC006629-7|ABF71723.1| 402|Caenorhabditis elegans Hypothetical
protein F12E12.11 protein.
Length = 402
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPF----LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK 436
++ G D LVNNA AV +P +D +FDKTF +N+++V+ + Q +I K
Sbjct: 203 LQKFGRLDILVNNAGAAVNDPQGRMGIDQQIEDFDKTFQINMRSVVTLVQKAKEHLI--K 260
Query: 437 THGAIVNISS-QXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
T G I+N+SS A D Y + K + A+ L +G++VN+
Sbjct: 261 TKGEIINVSSIGGGPHAQPDMMYYGMSKAALDQFTRSTAITLIQHGVRVNS 311
>Z81586-8|CAB04694.2| 305|Caenorhabditis elegans Hypothetical
protein T05F1.10 protein.
Length = 305
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
++V+ +G D LVNNA +A + LD S + +++FDVNVKA Q M+++
Sbjct: 109 QQVINDIGKVDILVNNAGIATAKMILDSSENEINRSFDVNVKAHFYTVQQFLPAMLKD-N 167
Query: 440 HGAIVNISSQXSKAALKDHTIYSLQK 517
+G IV I+S K YS K
Sbjct: 168 NGHIVTIASAAGKMGSSGLADYSSTK 193
>Z72508-2|CAA96635.1| 284|Caenorhabditis elegans Hypothetical
protein F28H7.2 protein.
Length = 284
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPF----LDCSPSNFDKTFDVNVKAVLNISQVVARKMI 427
+ ++ G D LVNNA + + ++ S + KTF++NV++V+ ++Q AR +
Sbjct: 78 KSTLDKFGKIDILVNNAGAGIPDAQGKSGVNQSIDTYHKTFELNVQSVIEMTQK-ARPHL 136
Query: 428 ENKTHGAIVNISSQXS-KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
KT G IVNISS + AA YS+ K T A++L P GI+VN+
Sbjct: 137 A-KTQGEIVNISSIGAGPAAQVASPYYSIAKAALDQYTRTAAIDLVPEGIRVNS 189
>AC006677-5|AAF39950.1| 280|Caenorhabditis elegans Hypothetical
protein R05D8.7 protein.
Length = 280
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPF----LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK 436
++ G D LVNNA A+ + F D + KT +N++AV+ +++ V ++ +K
Sbjct: 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK 140
Query: 437 THGAIVNISSQXS-KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
G IVN+SS + A D Y++ K + A++L +GI+VN+
Sbjct: 141 --GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNS 189
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG- 445
V+SLG LVN A + L +D VN+ V ++SQ + ++N H
Sbjct: 77 VKSLGTPSILVNCAGITKDSTLLKMKQEQWDSVIKVNLTGVFHVSQAFVKASVDNNNHPL 136
Query: 446 AIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
+I+N+SS K T Y+ K + ++ A EL ++VNA
Sbjct: 137 SIINVSSIVGKMGNFGQTNYAATKAGVIGFTKSAAKELAKKNVRVNA 183
>Z83238-12|CAB05801.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEP----FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK 436
V GH D LVNNA A+ + +D S FD T +N+++V+ + Q +I++K
Sbjct: 81 VRKFGHLDILVNNAGGALMDAQGRVGMDQDISVFDNTMQINMRSVVTLVQKAKEHLIKSK 140
Query: 437 THGAIVNISSQXS-KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
G I+N+S+ + T Y + K + A+ L +G++VN+
Sbjct: 141 --GEIINVSAMAAGHHGDPIATFYGMSKAALDQFTRSSAISLIQHGVRVNS 189
>Z81513-14|CAB04187.1| 279|Caenorhabditis elegans Hypothetical
protein F26D2.15 protein.
Length = 279
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEP----FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK 436
V GH D LVNNA A+ + +D S FD T +N+++V+ + Q +I++K
Sbjct: 81 VRKFGHLDILVNNAGGALMDAQGRVGMDQDISVFDNTMQINMRSVVTLVQKAKEHLIKSK 140
Query: 437 THGAIVNISSQXS-KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
G I+N+S+ + T Y + K + A+ L +G++VN+
Sbjct: 141 --GEIINVSAMAAGHHGDPIATFYGMSKAALDQFTRSSAISLIQHGVRVNS 189
>AF022981-7|AAG24204.1| 280|Caenorhabditis elegans Hypothetical
protein W03F9.9 protein.
Length = 280
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPFLDCSPSNFD----KTFDVNVKAVLNISQVVARKMIENK 436
++ G + L+NNA + +P + S KTF +N ++V+ ++Q + R + N
Sbjct: 82 LKKFGKINILINNAGALIVDPEGKTNTSTGVETCLKTFQLNFQSVVEMTQKI-RPHLAN- 139
Query: 437 THGAIVNISSQXSKAALKDH-TIYSLQKLLWML*LETMALELGPYGIKVN 583
THG IVN+SS + A ++ YS K A++L P GI+VN
Sbjct: 140 THGEIVNVSSVGAGPAAENRFPYYSAAKAALDQYSRNTAIDLIPDGIRVN 189
>Z74042-10|CAA98524.1| 307|Caenorhabditis elegans Hypothetical
protein T11F9.11 protein.
Length = 307
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
++ E++G D L+NNA + + DC +KT VN A+ ++ M+E K
Sbjct: 108 KETKEAVGDIDILINNAGIVTGKKLFDCPDELMEKTMAVNTNALFYTAKNFLPSMLE-KD 166
Query: 440 HGAIVNISSQXSK 478
+G +V I+S K
Sbjct: 167 NGHLVTIASMAGK 179
>AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical
protein Y39A1A.11 protein.
Length = 296
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/97 (29%), Positives = 48/97 (49%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQXS 475
LVN A + L S + + +VN+ +V +SQ++AR+ + + +IVN+SS
Sbjct: 135 LVNCAGITKDATLLKMSQNQWQDVMNVNLNSVFLMSQMIARESVAAGSPLSIVNVSSIVG 194
Query: 476 KAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
K T Y+ K + ++ A EL I+VNA
Sbjct: 195 KIGNFGQTNYAATKSGVIGFTKSAARELATKNIRVNA 231
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPF----LDCSPSNFDKTFDVNVKAVLNISQVVARKMI 427
+ + G D L+NNA A +P + + FD +N+++V+ + + +I
Sbjct: 78 KSTLSRFGKIDILINNAGAAFADPSGKIGSEAAIGIFDDMMKLNLRSVVELVKKCRPHLI 137
Query: 428 ENKTHGAIVNISS-QXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
+K G IVN+SS +T Y + K ++ALEL P+ ++VN+
Sbjct: 138 ASK--GEIVNVSSIAAGPQPYIYYTYYGICKAGLDQLTRSLALELIPFDVRVNS 189
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Frame = +2
Query: 269 VESLGHFDALVNNAAVAVCEPF----LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK 436
++ G + L+NNA + + CS N K F +N+++V+ + Q V + K
Sbjct: 81 LDKFGKINILINNAGANIPDSQGQTRTKCSIENLTKMFQLNLQSVVEMVQKVRPHLA--K 138
Query: 437 THGAIVNISS-QXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
T G IVNISS AA YS K A++L GI++N
Sbjct: 139 TRGEIVNISSIGAGPAAQPASPYYSSAKAALDQYSRCAAIDLISEGIRIN 188
>Z81581-10|CAN86611.1| 309|Caenorhabditis elegans Hypothetical
protein T02E1.5b protein.
Length = 309
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 248 LGETRKVVES-LGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKM 424
+ T +V+S +G D LVNNA + + L C KT VN A+ ++ M
Sbjct: 105 INRTADLVKSEVGKVDILVNNAGIVTGKKLLQCPDELMVKTVSVNTNALFFTTKNFLPGM 164
Query: 425 IENKTHGAIVNISSQXSKAALKDHTIYSLQK 517
+E+ G IV I+S K + Y K
Sbjct: 165 LES-NKGHIVTIASMAGKCGVAGLVDYCASK 194
>Z81581-9|CAN86610.1| 307|Caenorhabditis elegans Hypothetical
protein T02E1.5a protein.
Length = 307
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +2
Query: 248 LGETRKVVES-LGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKM 424
+ T +V+S +G D LVNNA + + L C KT VN A+ ++ M
Sbjct: 103 INRTADLVKSEVGKVDILVNNAGIVTGKKLLQCPDELMVKTVSVNTNALFFTTKNFLPGM 162
Query: 425 IENKTHGAIVNISSQXSKAALKDHTIYSLQK 517
+E+ G IV I+S K + Y K
Sbjct: 163 LES-NKGHIVTIASMAGKCGVAGLVDYCASK 192
>AF016668-1|AAB66092.1| 257|Caenorhabditis elegans Dehydrogenases,
short chain protein13 protein.
Length = 257
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +2
Query: 290 DALVNNAAVAV-CEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISS 466
D LV+NAAV + + S +DK D+NVK+ +++ A +E G +V +SS
Sbjct: 90 DILVSNAAVNPHYGDLMKVTDSQWDKLLDLNVKSAFELTKE-AVPHLEASGRGNVVFVSS 148
Query: 467 QXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVNA 586
+ + + YS+ K +++AL L I+VN+
Sbjct: 149 VAGYSPMNEIGAYSVMKTTLTGLSKSLALNLARRNIRVNS 188
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 263 KVVESLGHFDALVNNAAVA---VCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIEN 433
K E G A+VNNA + + + FLD + + K ++N+ + + V K +
Sbjct: 120 KKCEQYGGLHAVVNNAGITGKHIADDFLDIN--EYLKVANINLWGPIRTTMAV--KKLLK 175
Query: 434 KTHGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
K G +V ++S ++ L YS+ K + + EL P+GI V+
Sbjct: 176 KARGRVVTVASICARVGLPGLGPYSVSKYGVSAYCDVIRQELRPFGISVH 225
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 263 KVVESLGHFDALVNNAAVA---VCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIEN 433
K E G A+VNNA + + + FLD + + K ++N+ + + V K +
Sbjct: 145 KKCEQYGGLHAVVNNAGITGKHIADDFLDIN--EYLKVANINLWGPIRTTMAV--KKLLK 200
Query: 434 KTHGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
K G +V ++S ++ L YS+ K + + EL P+GI V+
Sbjct: 201 KARGRVVTVASICARVGLPGLGPYSVSKYGVSAYCDVIRQELRPFGISVH 250
>U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,
short chain protein29 protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.046
Identities = 25/106 (23%), Positives = 47/106 (44%)
Frame = +2
Query: 260 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
+++ ++ G + ++ NAA+ F++ S K DVN+ +N + KM E K
Sbjct: 110 KEIEDTFGDVNIVICNAAILSFTSFMEISDELLRKCLDVNIFGTINTIRAFLPKM-ETKN 168
Query: 440 HGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIK 577
G IV + S + Y K +E++ +EL G++
Sbjct: 169 DGHIVCVCSIAGWSGETMGLSYCTSKFAVRGAMESLQMELRDRGLE 214
>Z81592-12|CAB04734.1| 260|Caenorhabditis elegans Hypothetical
protein F54F3.4 protein.
Length = 260
Score = 34.3 bits (75), Expect = 0.080
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 269 VESLGHFDALVNNAAV-AVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG 445
++ G + LVNN + L+ S +DK F+VNVKA ++++V I + G
Sbjct: 83 LQKFGKINILVNNHGINPAFGHILEVSDQVWDKLFEVNVKAGFQMTKLV-HPHIAKEGGG 141
Query: 446 AIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
AI+ +S + + Y + K + +A+ L I+VN
Sbjct: 142 AIIFNASYSAYKSPPGIAAYGVTKTTLVGLTRALAMGLAKDNIRVN 187
>Z79696-3|CAB01974.1| 260|Caenorhabditis elegans Hypothetical
protein F54F3.4 protein.
Length = 260
Score = 34.3 bits (75), Expect = 0.080
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 269 VESLGHFDALVNNAAV-AVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG 445
++ G + LVNN + L+ S +DK F+VNVKA ++++V I + G
Sbjct: 83 LQKFGKINILVNNHGINPAFGHILEVSDQVWDKLFEVNVKAGFQMTKLV-HPHIAKEGGG 141
Query: 446 AIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKVN 583
AI+ +S + + Y + K + +A+ L I+VN
Sbjct: 142 AIIFNASYSAYKSPPGIAAYGVTKTTLVGLTRALAMGLAKDNIRVN 187
>AF016685-15|AAG24139.2| 321|Caenorhabditis elegans Hypothetical
protein F59E11.2 protein.
Length = 321
Score = 32.3 bits (70), Expect = 0.32
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +2
Query: 281 GHFDALVNN-------AAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 439
G D LVNN A + + F D PS +D V ++ S AR M+E +
Sbjct: 94 GKLDILVNNVYNSLGKATEMIGKTFFDQDPSFWDDINGVGLRNHYYCSVYAARMMVERR- 152
Query: 440 HGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKV 580
G IVN+ S + + Y K MA+EL PY + V
Sbjct: 153 KGLIVNVGSLGGLKYV-FNVAYGAGKEALARMSTDMAVELNPYNVCV 198
>U41018-4|AAA82327.2| 321|Caenorhabditis elegans Dehydrogenases,
short chain protein26 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.0
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Frame = +2
Query: 272 ESLGHFDALVNNA--AVAVC-----EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIE 430
E+ D LVNNA AV C F + P +D +V ++ S R M +
Sbjct: 90 ETDNQLDILVNNAFSAVTKCGSGDTRKFFERDPEIWDDINNVGLRNQYYCSVYGTRIMRK 149
Query: 431 NKTHGAIVNISSQXSKAALKDHTIYSLQKLLWML*LETMALELGPYGIKV 580
N G IVNISS L Y + K+ MA EL GI V
Sbjct: 150 NGMKGLIVNISSLGGIMYLFT-VAYGVGKMALDRMSSDMAQELQDTGITV 198
>Z77652-3|CAB01115.1| 349|Caenorhabditis elegans Hypothetical
protein C06B3.5 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 374 VNVKAVLNISQVVARKMIENKTHGAIVNISSQXSKAALKDHTIYSLQK 517
+N V +S + +M+ KT G IVNI S A + + ++YS K
Sbjct: 160 LNTLPVTLLSAGILPQMVSRKT-GIIVNIGSVAGAAKMAEWSVYSASK 206
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical
protein T06E4.3b protein.
Length = 2514
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 282 PKDSTTF-LVSPNLLYQRLQCL*RGIHSEDFLSANEFVTMQL 160
P TF ++ P+LLY L RGI+S+ LS +F+ ++
Sbjct: 863 PNQKITFNMIRPSLLYWSLLSSARGINSKLTLSVIDFICQEM 904
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical
protein T06E4.3a protein.
Length = 2531
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 282 PKDSTTF-LVSPNLLYQRLQCL*RGIHSEDFLSANEFVTMQL 160
P TF ++ P+LLY L RGI+S+ LS +F+ ++
Sbjct: 863 PNQKITFNMIRPSLLYWSLLSSARGINSKLTLSVIDFICQEM 904
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 282 PKDSTTF-LVSPNLLYQRLQCL*RGIHSEDFLSANEFVTMQL 160
P TF ++ P+LLY L RGI+S+ LS +F+ ++
Sbjct: 863 PNQKITFNMIRPSLLYWSLLSSARGINSKLTLSVIDFICQEM 904
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical protein
C18H2.1 protein.
Length = 1770
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 210 YPSIDIVDVDIGDWERRGRLLN 275
YP I V++ DWERR R +N
Sbjct: 1397 YPFIKYYRVNLADWERRKRNMN 1418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,429,462
Number of Sequences: 27780
Number of extensions: 271252
Number of successful extensions: 735
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -