Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40210
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   7.0  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 220  RAKESRRAS*NKSNKDALMFPLVASCALFGLYIFFQFFSKEYINL 354
            + +++R A+  K  +D  +F      ALF L +F     K+Y+++
Sbjct: 1251 KEEKARIAADLKELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHI 1295


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 220  RAKESRRAS*NKSNKDALMFPLVASCALFGLYIFFQFFSKEYINL 354
            + +++R A+  K  +D  +F      ALF L +F     K+Y+++
Sbjct: 1251 KEEKARIAADLKELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHI 1295


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 410 VRSSRSWYQLRYQTFRSIFISPVV 481
           V+++  W QLRY+ +R   +S ++
Sbjct: 135 VKNTALWKQLRYEHYRLYQLSVLI 158


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 280 PLVASCALFGLYIFFQFFSKEYINLLLTGYFFFLGVLALSHLL 408
           PL     ++  Y  F  F+   + LL   +FF   ++   HLL
Sbjct: 139 PLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLL 181



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 328 FFSKEYINLLLTGYFFFLGVLALSHL--LSPIISFLVP 435
           +F   +I LL   YF++  ++   HL  L  I  F+VP
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVP 139


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 787 WRKTTSLIEPRSSWRRSPMTLVP 719
           W+ + S + PRSS + +P    P
Sbjct: 231 WQSSESSLRPRSSQKSAPGKRTP 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,518
Number of Sequences: 336
Number of extensions: 5016
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)