Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40209
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 151 6e-39
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 147 9e-38
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 138 6e-35
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 85 1e-18
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.82
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 151 bits (367), Expect = 6e-39
Identities = 74/83 (89%), Positives = 76/83 (91%)
Frame = +3
Query: 36 TEVKSVGDATHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVI 215
TEVKSV + HEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVI
Sbjct: 287 TEVKSV-EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVI 345
Query: 216 VLNHPGQISNGYTQLLDCPHCPH 284
VLNHPGQISNGYT +LDC H H
Sbjct: 346 VLNHPGQISNGYTPVLDC-HTAH 367
Score = 147 bits (357), Expect = 9e-38
Identities = 69/78 (88%), Positives = 73/78 (93%)
Frame = +1
Query: 271 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 450
HTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGR
Sbjct: 364 HTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGR 423
Query: 451 FAVRDMRQTVAVGVIKAV 504
FAVRDMRQTVAVGVIKAV
Sbjct: 424 FAVRDMRQTVAVGVIKAV 441
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 147 bits (357), Expect = 9e-38
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +1
Query: 271 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 450
HTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGR 423
Query: 451 FAVRDMRQTVAVGVIKAV 504
FAVRDMRQTVAVGVIK+V
Sbjct: 424 FAVRDMRQTVAVGVIKSV 441
Score = 144 bits (348), Expect = 1e-36
Identities = 69/83 (83%), Positives = 74/83 (89%)
Frame = +3
Query: 36 TEVKSVGDATHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVI 215
TEVKSV + HEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVI
Sbjct: 287 TEVKSV-EMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVI 345
Query: 216 VLNHPGQISNGYTQLLDCPHCPH 284
VLNHPGQISNGYT +LDC H H
Sbjct: 346 VLNHPGQISNGYTPVLDC-HTAH 367
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 138 bits (334), Expect = 6e-35
Identities = 66/80 (82%), Positives = 71/80 (88%)
Frame = +3
Query: 45 KSVGDATHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 224
KSV + HEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLN
Sbjct: 1 KSV-EMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLN 59
Query: 225 HPGQISNGYTQLLDCPHCPH 284
HPGQISNGYT +LDC H H
Sbjct: 60 HPGQISNGYTPVLDC-HTAH 78
Score = 83.4 bits (197), Expect = 2e-18
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 271 HTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 405
HTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 75 HTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 84.6 bits (200), Expect = 1e-18
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +3
Query: 36 TEVKSVGDATHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 173
TEVKSV + HEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 230 TEVKSV-EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.0 bits (52), Expect = 0.82
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 12 LPPGQPSLTEVKSV-GDATHEALQEAVPGDNVGF 110
+P P+LT ++ GDA + LQ A+ N+GF
Sbjct: 595 VPSKSPTLTHSPTMYGDALNANLQAALGDSNMGF 628
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 616 KYRSCMKNCAVNSSSYFLPLVAFS 545
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 474 DSCCRSHQGC 503
D+CCR+H C
Sbjct: 56 DACCRTHDMC 65
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 616 KYRSCMKNCAVNSSSYFLPLVAFS 545
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 474 DSCCRSHQGC 503
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 616 KYRSCMKNCAVNSSSYFLPLVAFS 545
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 474 DSCCRSHQGC 503
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 655 CSPFFLRNTFR*MKYRSCMKN 593
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 126 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 233
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 CLSLPPGQPSLTEVKSVGDATHEALQEAVPGD 98
C S PP P+ T +KSV + ++ PGD
Sbjct: 1751 CAS-PP--PAATSMKSVSSRRRQQRKQQTPGD 1779
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 CLSLPPGQPSLTEVKSVGDATHEALQEAVPGD 98
C S PP P+ T +KSV + ++ PGD
Sbjct: 1747 CAS-PP--PAATSMKSVSSRRRQQRKQQTPGD 1775
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,036
Number of Sequences: 438
Number of extensions: 4769
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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