Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40207
(702 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 144 2e-33
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 143 4e-33
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 137 2e-31
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 120 5e-26
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 116 4e-25
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 104 2e-21
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 100 7e-20
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 96 6e-19
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 96 8e-19
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 95 1e-18
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 93 6e-18
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 88 2e-16
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 86 7e-16
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 82 1e-14
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 79 1e-13
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 77 3e-13
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 75 2e-12
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 72 1e-11
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 68 2e-10
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 67 5e-10
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 65 2e-09
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 62 1e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 59 9e-08
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 56 6e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 56 1e-06
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 54 3e-06
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 8e-06
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 52 1e-05
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 51 2e-05
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 51 2e-05
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 51 3e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 4e-04
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 46 9e-04
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 43 0.006
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 42 0.011
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 37 0.55
UniRef50_A7SDA1 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.0
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 144 bits (348), Expect = 2e-33
Identities = 65/89 (73%), Positives = 81/89 (91%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL---LNMLN 171
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATL LNMLN
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLN 182
Query: 172 ISPFSYGLVVKQVYDSGTIFAPEILDINQ 258
ISPFSYGL+++QVYD+G++++PE+LDI +
Sbjct: 183 ISPFSYGLIIQQVYDNGSVYSPEVLDITE 211
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = +3
Query: 264 LRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIK 443
L +F GV N+A++ L IGYPT+AS PH+I NG+K +L K ++
Sbjct: 214 LHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273
Query: 444 DPSKF 458
DP+ F
Sbjct: 274 DPTAF 278
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 143 bits (346), Expect = 4e-33
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 137 bits (332), Expect = 2e-31
Identities = 63/86 (73%), Positives = 76/86 (88%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL ML I P
Sbjct: 123 VPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
F+YGL + QVYDSG++FAP ILDI +
Sbjct: 183 FTYGLKIVQVYDSGSVFAPSILDITE 208
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/67 (52%), Positives = 42/67 (62%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
+DL +F +G+ANVAA+SL IGYPT+AS PHSI NGFKNLL K F
Sbjct: 209 DDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVATDITFKEAEQAKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 VADPSAF 275
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 120 bits (288), Expect = 5e-26
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +1
Query: 13 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 192
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFSYG
Sbjct: 129 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYG 188
Query: 193 LVVKQVYDSGTIFAPEILDINQ 258
LVV+ VYD+G++F+PE+LD+ +
Sbjct: 189 LVVQSVYDNGSVFSPEVLDLTE 210
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
+ L KF +G++ V +L+LA+ YPT+A+APH N +KN L KEF
Sbjct: 211 DQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEF 270
Query: 438 IKDPSKF 458
+KDPSKF
Sbjct: 271 LKDPSKF 277
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 116 bits (280), Expect = 4e-25
Identities = 52/82 (63%), Positives = 67/82 (81%)
Frame = +1
Query: 13 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 192
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFSYG
Sbjct: 130 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYG 189
Query: 193 LVVKQVYDSGTIFAPEILDINQ 258
LVV+ VYD+G++F PE+L++ +
Sbjct: 190 LVVESVYDNGSVFNPEVLNLTE 211
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
+DL KF AGV+ + ALSLAI YPT+A+APH N +KN+L KEF
Sbjct: 212 DDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEF 271
Query: 438 IKDPSKF 458
+KDP+KF
Sbjct: 272 LKDPTKF 278
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 104 bits (249), Expect = 2e-21
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASEATLL LNI P
Sbjct: 122 IPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKP 181
Query: 181 FSYGLVVKQVYDSGTIFAPEI 243
F+YGL K +YD+G ++P I
Sbjct: 182 FTYGLEPKIIYDAGACYSPSI 202
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
EDL KF+ G+ N+AA+SL IGYPT+AS PHS+ N FKNLL
Sbjct: 205 EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLL 245
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 99.5 bits (237), Expect = 7e-20
Identities = 48/94 (51%), Positives = 64/94 (68%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
I A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LNI+P
Sbjct: 141 IKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINP 200
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQRISVPSSK 282
FSY L V V+D+G ++ P +LDI + S K
Sbjct: 201 FSYKLSVAHVFDNGNVYGPGVLDITSESIIESYK 234
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
E + ++ ++NVA++SL G PT ASAPHSI FKNLL
Sbjct: 227 ESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLL 267
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 96.3 bits (229), Expect = 6e-19
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +1
Query: 16 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 195
TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S+A LL MLNI PF Y +
Sbjct: 150 TGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKM 209
Query: 196 VVKQVYDSGTIFAPEILDINQ 258
+ Q+Y+ G I+ ++DI +
Sbjct: 210 TMHQIYEDGVIYDSSLIDIGE 230
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
ED+ + ++ VAA SL G T AS P+++ N FK++L
Sbjct: 231 EDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDIL 271
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 95.9 bits (228), Expect = 8e-19
Identities = 46/88 (52%), Positives = 62/88 (70%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL L+ISP
Sbjct: 130 VPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISP 189
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQRI 264
F Y + V+ V+D G +F E L I +
Sbjct: 190 FYYQVEVQSVWDRGMLFLREDLSITDDV 217
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 285 GVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
G++NVAALSL G PT A+ PH I + FK LL
Sbjct: 225 GISNVAALSLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = +1
Query: 16 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 195
TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS+GL
Sbjct: 138 TGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGL 197
Query: 196 VVKQVYDSGTIFAPEILDINQRI 264
VK VYD+G++++ E+L + I
Sbjct: 198 KVKNVYDNGSVYSAEVLKLTNDI 220
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +3
Query: 264 LRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIK 443
L KF GV N+AA+SL +G PT ASAPHSI +GFKNL+ +K
Sbjct: 221 LLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHVVDYTFSQAEGLLAVLK 280
Query: 444 DPSK 455
DPSK
Sbjct: 281 DPSK 284
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 93.1 bits (221), Expect = 6e-18
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL L I+P
Sbjct: 130 VPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINP 189
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
F YG V+ VYD+G ++ + LD+ +
Sbjct: 190 FKYGAVIDVVYDNGIVYDAKALDLTE 215
Score = 39.5 bits (88), Expect = 0.078
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 261 DLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
D+ KFQ GV A+SLA PT A+ PH + N F+ LL
Sbjct: 217 DIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALL 256
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS ATLL N++P
Sbjct: 124 IPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP 183
Query: 181 FSYGLVVKQVYDSGTIFAPEILDI 252
SYG+ V+ VYD G I+ ++LDI
Sbjct: 184 -SYGVDVRTVYDDGVIYDAKVLDI 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
ED+ KF GV+NVAALS A G T AS PH FKN++ K++
Sbjct: 209 EDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILKKW 268
Query: 438 IKDPSKF 458
+++P F
Sbjct: 269 VENPEAF 275
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G SE +LL +NI P
Sbjct: 141 IPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQP 200
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQRI 264
FSYG+ YD+G I E+L I+ +
Sbjct: 201 FSYGMKCFSDYDNGEILTEEVLSISPSV 228
Score = 37.5 bits (83), Expect = 0.32
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 255 PEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 377
P + F +AA+SLA GY T S PH I N FK+L
Sbjct: 226 PSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDL 266
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
IP TG+ P FF AL IPTKI KG I+I D +LK G KVG S+A LL L P
Sbjct: 141 IPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKP 200
Query: 181 FSYGLVVKQVYDSGTIFAPEILDIN 255
F YG+ V YD+G+I + + +N
Sbjct: 201 FLYGMEVLACYDNGSILNKQQVSVN 225
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 261 DLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 377
D+ AKFQ V NV+A+SL G+ ASAP+ +AN FK+L
Sbjct: 228 DIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDL 266
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +1
Query: 16 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 195
T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S ATLL L I PF Y +
Sbjct: 129 TQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAM 188
Query: 196 VVKQVYDSGTIFAPEILDINQRI 264
+YD G I+ +L+I+ +
Sbjct: 189 SALNLYDDGEIYDAAVLEIDDSV 211
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 16 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 195
T + P AL+I KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L
Sbjct: 130 TSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTL 189
Query: 196 VVKQVYDSGTIFAPEILDINQRI 264
++ +YD G ++ P IL I + +
Sbjct: 190 KIEALYDHGNMYDPSILAITEEV 212
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 377
E L KF+ G+ NV L+LA+GYP ASAPH + + FK++
Sbjct: 211 EVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDI 250
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/89 (40%), Positives = 54/89 (60%)
Frame = +1
Query: 16 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 195
T + P+ FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF +
Sbjct: 127 TNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEI 186
Query: 196 VVKQVYDSGTIFAPEILDINQRISVPSSK 282
+ Y++G + P +L+ N+ + S K
Sbjct: 187 KIISFYENGKSYDPSVLNFNESMFDKSFK 215
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +3
Query: 252 QPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 380
+PEDLRAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NLL
Sbjct: 781 KPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLL 823
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = +1
Query: 52 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL--NMLNISP 180
ALSIP KISKGTIEIINDV ILK GDK+ ++ ++L+I P
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKIEQVYGSIFSPDILDIKP 782
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 22 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 201
L P +T FFQAL IPT+ISK +IEII D+ ++ + S+ LL L+I P YG+ +
Sbjct: 125 LSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKI 184
Query: 202 KQVYDSGTIFAPEILDIN 255
K+++ S +IL +N
Sbjct: 185 KKIFSSKGEINLKILQMN 202
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/84 (36%), Positives = 53/84 (63%)
Frame = -1
Query: 252 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 73
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 72 FGRDGKSLEERGFLWTEAGVVGGN 1
G + +SLEER W GV G N
Sbjct: 181 LGWNTQSLEERSLTWFHTGVDGEN 204
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 IPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
+PA T L P QAL IP +I KG + I D +LK G+ + A +LN L I
Sbjct: 124 VPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQ 183
Query: 178 PFSYGLVVKQVYDSGTIFAPEILDINQR 261
P GL V VY+ G ++ P++L I+++
Sbjct: 184 PLEVGLDVLAVYEDGIVYTPDVLAIDEQ 211
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
+PA NTG+ P S F L IPT++ +G+I I D + KPGD + A LL+ L +
Sbjct: 128 LPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLK 187
Query: 178 PFSYGLVVKQVYDSGTIFAPEILDIN 255
P L +K +Y G + +P+ ++++
Sbjct: 188 PIESKLQIKTIYLDGKVVSPKDVELD 213
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 59.3 bits (137), Expect = 9e-08
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 174
+PA NTG+ GP T F +A IPTKI +GTI I+ D +K G+ +G A LL L+I
Sbjct: 109 VPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDI 167
Query: 175 SPFSYGLVVKQVYDSGTIFAPEILDIN 255
P + ++ + G I++ E L ++
Sbjct: 168 KPVEAVIALESALEEGVIYSREDLAVD 194
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 56.4 bits (130), Expect = 6e-07
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 1 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
+PA NTG+ P S F L IPT+I G I + D + KPGD V A LL ++N+
Sbjct: 134 VPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVK 193
Query: 178 PFSYGLVVKQV 210
P L VK V
Sbjct: 194 PVYESLKVKAV 204
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
IP NTGL P S F L IPT+I +I I D + KPGD + A+LL L+I+
Sbjct: 126 IPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIA 185
Query: 178 PFSYGLVVKQVYDSGTIFAPE--ILDINQ 258
+ +K YD G I + +LD+ +
Sbjct: 186 LKEVKINIKAAYDHGIIILRDQLVLDLEE 214
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +3
Query: 288 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 458
V NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 57
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 174
IPA +TG+ GP S F L + TK+ G + ++ D + KPGD + A +L L I
Sbjct: 127 IPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGI 185
Query: 175 SPFSYGLVVKQVYDSGTIFAPEILDIN 255
P L +K Y G + E L ++
Sbjct: 186 MPVYVKLKIKVAYHEGLVIPAESLKLD 212
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +1
Query: 1 IPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 174
+PA NTG+ GP T F +A IPTKI +GTI I D + G+ + A +L L+I
Sbjct: 123 VPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDI 181
Query: 175 SPFSYGLVVKQVYDSGTIFAPE--ILDINQ 258
P G+ + + G +A E I+D+ +
Sbjct: 182 KPVEAGITLFTALEDGLKYAEEEMIIDVEK 211
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
+PA +TGL P S F L I T + GTI I D + KPGD + A+LL L I+
Sbjct: 132 VPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLGIT 191
Query: 178 PFSYGLVVKQVY 213
P + +K Y
Sbjct: 192 PMELKMKIKGAY 203
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 49 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 228
Q+ IP I G + + + K G+ V AT+L+ L I P GL ++ YD GTI
Sbjct: 142 QSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTI 201
Query: 229 FAPEILDINQ 258
+ PE+L +++
Sbjct: 202 YEPELLAVDE 211
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
+PA +T P Q + IP KI KG+I + +D I+ G+++ + A +L L I
Sbjct: 119 VPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIH 178
Query: 178 PFSYGLVVKQVYDSGTIFAPEILDINQRISV 270
P G+ + V + TI+ ++L I++ ++
Sbjct: 179 PMEVGIDLLAVCEGDTIYTADVLAIDEEETI 209
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +1
Query: 49 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 228
Q +P I KG + + ++K G+ V A L L+I P GL VK + DSG I
Sbjct: 139 QMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVI 198
Query: 229 FAPEILDIN 255
PE L I+
Sbjct: 199 LTPETLAID 207
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 49 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 228
Q + IP I G ++I ++K G+ + A L L + P GL+++ Y TI
Sbjct: 139 QQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETI 198
Query: 229 FAPEILDINQRI 264
F P++L I++ +
Sbjct: 199 FTPDLLAIDEEV 210
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 IPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 177
IP T L P S F L I ++ G I I + + KPGD + A LL L I
Sbjct: 130 IPEGMTNLTPGPILSVFGKLRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIR 189
Query: 178 PFSYGLVVKQVYDSGTIFAPEIL 246
P G+ VK D G + ++L
Sbjct: 190 PIEKGVRVKFAIDGGVLITEDLL 212
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 13 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
N +GP +T +AL + TK++ G IEI+ D ++K G+ V A +L L I P
Sbjct: 124 NIPVGPIQTEL-RALGVKTKVTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_O94085 Cluster: Putative uncharacterized protein
YLR339C; n=5; Saccharomycetales|Rep: Putative
uncharacterized protein YLR339C - Saccharomyces
cerevisiae (Baker's yeast)
Length = 183
Score = 36.7 bits (81), Expect = 0.55
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2
Query: 89 IVPFEILVGMERAWKKEVFSGPRPVLWA 6
+VP ILVG +AWKKEV G PVL A
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTA 28
>UniRef50_A7SDA1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1051
Score = 32.7 bits (71), Expect = 9.0
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -2
Query: 302 SYISNSSLELGTEILW-LMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLS 126
S+ S +L + +E+L L+ + G++ T LT+ M+N+ + + P
Sbjct: 684 SHYSTQALTVLSEVLASLLDMVFGSEEKDRVTTILTS------VMYNVTPYMKNHGPRNV 737
Query: 125 PGFKMCTSLMISIVPFEILVGMERAWKKEV 36
P F+ C +L+ ++ ++ M RAW+KEV
Sbjct: 738 PNFRACCALVSALSGYQY---MRRAWRKEV 764
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,444,945
Number of Sequences: 1657284
Number of extensions: 11396242
Number of successful extensions: 30685
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 29696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30669
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -