Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40207
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 143 6e-34
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 143 6e-34
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 143 6e-34
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 143 6e-34
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 140 3e-33
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 140 6e-33
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 81 5e-15
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 61 4e-09
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 61 4e-09
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 57 7e-08
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 31 3.0
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.3
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 5.3
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 5.3
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 5.3
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 5.3
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.3
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 60.9 bits (141), Expect = 4e-09
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG++ +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 143 bits (346), Expect = 6e-34
Identities = 64/86 (74%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 140 bits (340), Expect = 3e-33
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILD 249
FS+GLV++QV+D+G+I+ PE+LD
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLD 205
Score = 60.5 bits (140), Expect = 6e-09
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L GYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 140 bits (338), Expect = 6e-33
Identities = 63/86 (73%), Positives = 78/86 (90%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 180
+PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISP
Sbjct: 123 VPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISP 182
Query: 181 FSYGLVVKQVYDSGTIFAPEILDINQ 258
FS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITE 208
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 269 LADPSAF 275
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 80.6 bits (190), Expect = 5e-15
Identities = 35/47 (74%), Positives = 44/47 (93%)
Frame = +1
Query: 118 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDINQ 258
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI +
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 48
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 258 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEF 437
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L K F
Sbjct: 49 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 108
Query: 438 IKDPSKF 458
+ DPS F
Sbjct: 109 LADPSAF 115
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 60.9 bits (141), Expect = 4e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 99
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 123 VPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 56.8 bits (131), Expect = 7e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 285 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 458
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 213
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 60.9 bits (141), Expect = 4e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 1 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 99
+PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 122 VPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 56.8 bits (131), Expect = 7e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 285 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 458
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 212
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 56.8 bits (131), Expect = 7e-08
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 285 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKF 458
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 8 PTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLKPPFSTC*TSLHS 184
P TP + P S S +K++T Y + S P T L PPFST + +
Sbjct: 288 PPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHPQTTLTTHVPPFSTSSVTPST 347
Query: 185 HMVL 196
H V+
Sbjct: 348 HTVI 351
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 218 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 99
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,361,461
Number of Sequences: 237096
Number of extensions: 1831204
Number of successful extensions: 3992
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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