Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40205
(811 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 133 4e-30
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 117 4e-25
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 112 9e-24
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 103 7e-21
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 101 2e-20
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 96 8e-19
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 94 4e-18
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 92 1e-17
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 91 4e-17
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 89 9e-17
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 88 2e-16
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 86 1e-15
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 81 2e-14
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 81 3e-14
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 80 7e-14
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 79 1e-13
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 77 5e-13
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 74 5e-12
UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 73 9e-12
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 73 9e-12
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 73 1e-11
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 72 2e-11
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 71 3e-11
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 70 6e-11
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 68 3e-10
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 61 3e-08
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 60 5e-08
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 60 6e-08
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 60 9e-08
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 59 1e-07
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 58 3e-07
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 57 5e-07
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 57 5e-07
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 57 6e-07
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 57 6e-07
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 57 6e-07
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 56 1e-06
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 56 1e-06
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 54 3e-06
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 53 7e-06
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 53 7e-06
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 53 1e-05
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 52 2e-05
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 51 3e-05
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 50 7e-05
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 49 2e-04
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 47 6e-04
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 47 6e-04
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 46 0.001
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 45 0.002
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 44 0.003
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 43 0.008
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 43 0.008
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 43 0.011
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 43 0.011
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 42 0.014
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 42 0.018
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 40 0.056
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 40 0.098
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 38 0.23
UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Para... 38 0.40
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 37 0.52
UniRef50_A5K4P8 Cluster: SMC family, C-terminal domain containin... 37 0.69
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 36 1.2
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 35 2.1
UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 34 3.7
UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schi... 34 3.7
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 34 3.7
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 34 4.9
UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG241... 34 4.9
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 34 4.9
UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.9
UniRef50_Q55DD5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffith... 33 8.5
UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 33 8.5
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 33 8.5
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 133 bits (322), Expect = 4e-30
Identities = 58/105 (55%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 FHIYQRPK-KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 374
++I+ R + K ++ + +G+ GCW DTL+LT ++ RMQ YEH H ++MTT AVAQML
Sbjct: 53 YNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQML 112
Query: 375 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
S +Y +RFFPYYVSN+LAG+D++GKG VYSYDPIGHC + +RA
Sbjct: 113 SIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRA 157
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +1
Query: 58 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 237
E FP+Y VPG K F PY NGGSIVAIAGDD+AVI ADTRLS+G++I++R Q KLFKL
Sbjct: 7 EQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKL 66
Query: 238 SESTVL 255
S TVL
Sbjct: 67 SPQTVL 72
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 509 GGSAAAQLQPLLDNQIGLKNM--QNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD 673
GG+A LQP+LDNQIG KNM ++ + L +E+A+ + +RDIYTGD
Sbjct: 158 GGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFIS-AAERDIYTGD 213
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 117 bits (281), Expect = 4e-25
Identities = 53/105 (50%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 FHIYQRPK-KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQML 374
F I+ R K ++ + IG +G D LTLT++++AR++MY+H +NK+MTT A+A ML
Sbjct: 61 FSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML 120
Query: 375 STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
ST+LY +RFFPYYV N++ GLD +GKG VYS+DP+G R +F+A
Sbjct: 121 STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKA 165
Score = 77.0 bits (181), Expect = 5e-13
Identities = 33/57 (57%), Positives = 45/57 (78%)
Frame = +1
Query: 85 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
G Q RF PY NGG+I+AIAG+D+A++ +DTRLS GFSI+TRD K +KL++ TV+
Sbjct: 24 GPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI 80
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +2
Query: 509 GGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD 673
GGSA+A LQPLLDNQ+G KNMQNV PL ++A+ + V +RD+YTGD
Sbjct: 166 GGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD-VFISAAERDVYTGD 219
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 112 bits (270), Expect = 9e-24
Identities = 47/86 (54%), Positives = 68/86 (79%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG +G D LTLT++++AR++MY+H +NKSMT+ A+A MLST+LY +RFFPYYV N++
Sbjct: 77 IGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIG 136
Query: 432 GLDSDGKGCVYSYDPIGHCARHNFRA 509
GLD +G+G VYS+DP+G R ++A
Sbjct: 137 GLDEEGRGAVYSFDPVGSYQRDTYKA 162
Score = 80.2 bits (189), Expect = 6e-14
Identities = 32/74 (43%), Positives = 53/74 (71%)
Frame = +1
Query: 34 SYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR 213
S + N +Y G +H+F PYA NGG+++A+AG+D+A++ +DTRLS G+SI++R
Sbjct: 4 SAQACGANGRMKDYHYTGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSR 63
Query: 214 DQKKLFKLSESTVL 255
D K +KL+++TV+
Sbjct: 64 DSPKCYKLTDTTVI 77
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2
Query: 509 GGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD 673
GGSA+A LQPLLDNQIG KNM+NV + PL +EKA+ + V +RD+YTGD
Sbjct: 163 GGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKD-VFISAAERDVYTGD 216
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 103 bits (246), Expect = 7e-21
Identities = 46/96 (47%), Positives = 65/96 (67%)
Frame = +3
Query: 222 KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 401
K ++ + ++ ++G D L + L AR +Y+H+HNK M+ PA+AQ+LS LYYKRF
Sbjct: 46 KICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRF 105
Query: 402 FPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
FPYY NVL GLDS+GKGCV++YD +G R + A
Sbjct: 106 FPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSA 141
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +1
Query: 112 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCAL 56
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 101 bits (242), Expect = 2e-20
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+ ++G D L ++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL
Sbjct: 58 LSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLG 117
Query: 432 GLDSDGKGCVYSYDPIGHCARHNFRA 509
GLD +GKGCV++YD +G R + A
Sbjct: 118 GLDEEGKGCVFTYDAVGSYERVGYGA 143
Score = 70.5 bits (165), Expect = 5e-11
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
KQH + PY +NGG+ VAIAG DY VI ADTR+STG+SI +RD K+ KL++ VL
Sbjct: 3 KQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVL 58
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 96.3 bits (229), Expect = 8e-19
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +3
Query: 294 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 473
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60
Query: 474 PIGHCARHNFRA 509
+G R + A
Sbjct: 61 AVGSYERVGYGA 72
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 93.9 bits (223), Expect = 4e-18
Identities = 41/97 (42%), Positives = 60/97 (61%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
+K Q+ + + G D + ++ R++ YEH HNK+M ++A+M+ TMLY KR
Sbjct: 63 RKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKR 122
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
FFPYYV N+L G++ DG G VYS+DP+G R RA
Sbjct: 123 FFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRA 159
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/65 (46%), Positives = 47/65 (72%)
Frame = +1
Query: 61 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLS 240
++ ++A + H F PY+DNGGSI+AIAG D+++I DTR S G+SI TR +K+++L+
Sbjct: 10 SYQDHAAGPVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLT 69
Query: 241 ESTVL 255
+ VL
Sbjct: 70 DKVVL 74
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 92.3 bits (219), Expect = 1e-17
Identities = 38/87 (43%), Positives = 59/87 (67%)
Frame = +3
Query: 222 KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 401
K Q+ + + +G DT+ L + L++ ++ +E EH K M+TPA+AQ LS LYYKRF
Sbjct: 64 KIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRF 123
Query: 402 FPYYVSNVLAGLDSDGKGCVYSYDPIG 482
FPYY N++AG+D G+G +++YD +G
Sbjct: 124 FPYYTFNLVAGVDEQGEGWIWTYDAVG 150
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 RFEPYADNGGSIVAIAGDDYAVIGADTRLST-GFSIYTRDQKKLFKLSESTVL 255
RFE Y DNGG+++A+AG DY VI DTR+S G+ I TR K+F+L++ VL
Sbjct: 22 RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVL 74
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+ G D L L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV +LA
Sbjct: 92 LSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILA 151
Query: 432 GLDSDGKGCVYSYDPIGHCARHNFRA 509
G+D DGKG +YSYDP+G R RA
Sbjct: 152 GMDEDGKGALYSYDPVGSYEREYCRA 177
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 85 GAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSE 243
G KQH F PY DNGGS + IAG DYA++ DTR +G++I TR KLFK+ E
Sbjct: 27 GPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGE 80
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 89.4 bits (212), Expect = 9e-17
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = +3
Query: 222 KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 401
K Q+ + + +G D L + L A++++YE EHNK+ + A+AQ+LS +LY KRF
Sbjct: 77 KTCQLTNKCILACSGMLADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRF 136
Query: 402 FPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
FPYY +L+GLD GKG VY YD +G +H F A+
Sbjct: 137 FPYYSFCLLSGLDEQGKGVVYGYDAVGSFDQHKFVAL 173
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1
Query: 85 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
G +H F PY +NGGS VA+AGDD+ VI ADTRLS + I +R K +L+ +L
Sbjct: 31 GKIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCIL 87
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 201 HIYQRPKKAVQII*EYSIGAT-GCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 377
+I R + +QI+ + I T G + D L L ++LQ+R+ Y ++ M+ A++LS
Sbjct: 77 NILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS 136
Query: 378 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
LYY+RFFPYY +LAG+D GKG V+SYDPIG R + A
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSA 180
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/56 (35%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLS-TGFSIYTRDQKKLFKLSESTVL 255
++ R+ PY+ GGS AI+G+++A++ +DTR++ +I TRD +K+ L+++ +L
Sbjct: 40 ERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIIL 95
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 85.8 bits (203), Expect = 1e-15
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G +G D L L +L+ ++++Y + HN+ T A+AQ+LST+LY +RFFPYY N+L
Sbjct: 58 LGTSGMQADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILC 117
Query: 432 GLDSDGKGCVYSYDPIGH 485
G+D GKG V YD +G+
Sbjct: 118 GIDEQGKGVVCGYDAVGN 135
Score = 62.9 bits (146), Expect = 9e-09
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +1
Query: 94 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
+ RF PY +NGG+++A ++YAVI ADTRLS + I+TR KLFKL++ +L
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCIL 58
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+ A G D L ++ +++Y +++NK + + A+ + MLY KRFFPYYV ++A
Sbjct: 77 VTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIA 136
Query: 432 GLDSDGKGCVYSYDPIGHCARHNFRA 509
GLD +GKG VYSYDP+G R RA
Sbjct: 137 GLDEEGKGAVYSYDPVGSYEREFCRA 162
Score = 40.7 bits (91), Expect = 0.042
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 94 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
+HRF PY GDD+A++ DTR +TG+SI +R Q K+F + ++ ++
Sbjct: 34 EHRFNPYG----------GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILV 77
Score = 36.7 bits (81), Expect = 0.69
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 509 GGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD 673
GGSAA+ + P LD+Q+ KN Q PL E+AL + +R I+ GD
Sbjct: 163 GGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSS-ATERHIHVGD 216
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 81.0 bits (191), Expect = 3e-14
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+ +G + D L++ L AR+ MY++ + K A+A +LS LYYKRFFPYY N+LA
Sbjct: 86 LATSGMYADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLA 145
Query: 432 GLDSDGKGCVYSYDPIG 482
G D G+G V +YD +G
Sbjct: 146 GFDDKGEGLVINYDAVG 162
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +1
Query: 88 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
AK++ F PY N G++ AIA D+ ++ D R+S G+SI +RD KL +L+++ L
Sbjct: 31 AKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFL 86
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 79.8 bits (188), Expect = 7e-14
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = +3
Query: 222 KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 401
K Q+ + + G + D + L + LQ R+Q+YE ++ +T VA +LS LY +RF
Sbjct: 69 KLSQLTDKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRF 128
Query: 402 FPYYVSNVLAGLDSDGKGCVYSYDPIG 482
FPYY N+LAGLD + G VY YD IG
Sbjct: 129 FPYYTFNLLAGLDENNHGVVYGYDAIG 155
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +1
Query: 91 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
K ++ PY DN G+++A+ ++ DTRLS G++I +RD KL +L++ VL
Sbjct: 25 KSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVL 79
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 79.4 bits (187), Expect = 1e-13
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 428
+ ++G D L L ++L+ R+Q Y++ + K +T A+A++ STMLY +RFFPYY N++
Sbjct: 96 LASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMI 155
Query: 429 AGLDSDGKGCVYSYDPIG 482
G+D G G YSYDP+G
Sbjct: 156 VGIDEKGAGVCYSYDPVG 173
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 85 GAKQH--RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKLSESTVL 255
GAK H + PY DNGG+I AIAG +Y V+GADTRL+ F I+TR D KLFKL++ L
Sbjct: 37 GAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFL 96
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 512 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD---FHL 682
GSA++ ++PLLD + ++M A L E+ALG + +RDI+TGD FH+
Sbjct: 184 GSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKN-AFTGAAERDIFTGDTVCFHI 242
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
I G D L L A + MY+++H K++ A AQ +STMLY KRFFPY + ++A
Sbjct: 61 ISVIGFAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVA 120
Query: 432 GLDSDGKGCVYSYDPIG 482
G+D+DG+G +Y YDP G
Sbjct: 121 GIDADGQGAIYYYDPAG 137
Score = 56.0 bits (129), Expect = 1e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +1
Query: 88 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 246
AK+ RF PY NGG+ + ++G D+A++ DTR + G++I TR + K+F + ++
Sbjct: 2 AKETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDA 54
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 428
+ A G D L + + ++ Y +HN K ++ + A+ + +LY KRFFPYYV ++
Sbjct: 71 MSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTII 130
Query: 429 AGLDSDGKGCVYSYDPIGHCARHNFRA 509
AGLD DGKG VYS+DP+G R RA
Sbjct: 131 AGLDEDGKGAVYSFDPVGSYEREQCRA 157
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +1
Query: 94 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
+H+F PY DNGG+I+ IAG+D+AV+ DTR T +SI +R + K+F ++ V+
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVM 71
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 73.7 bits (173), Expect = 5e-12
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +3
Query: 261 TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD 440
+G D LT ++A ++ Y++E+ K M+T +VAQ+LS LY RFFPYY ++LAG++
Sbjct: 74 SGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGIN 133
Query: 441 SDGKGCVYSYDPIG 482
S GK Y+YD +G
Sbjct: 134 SKGKAVTYNYDAVG 147
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 55 NENFPEYAVPGAK-QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 231
N+ F + V AK + ++ PY DN G+ V I G+D+ VI +DTR+S + I TR+ K++
Sbjct: 4 NKMFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIY 63
Query: 232 KLSESTV 252
L+ V
Sbjct: 64 PLTSKCV 70
>UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S
proteasome beta 6 subunit; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 20S proteasome
beta 6 subunit - Strongylocentrotus purpuratus
Length = 165
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1
Query: 55 NENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFK 234
+E P Y +Q RF PY NGG+I+A+AGDDYA+I +DTRLS GFSI+TRD K ++
Sbjct: 8 HETVPSYHP--VEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYR 65
Query: 235 L 237
L
Sbjct: 66 L 66
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 512 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGD 673
GS++A LQPLLDNQIG KN + + P+P +KA+ + V +RDIYTGD
Sbjct: 91 GSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVKD-VFISAAERDIYTGD 143
Score = 35.9 bits (79), Expect = 1.2
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 447 GKGCVYSYDPIGHCARHNFRA 509
GKGCVYS+DP+G R +RA
Sbjct: 69 GKGCVYSFDPVGSYERETYRA 89
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 72.9 bits (171), Expect = 9e-12
Identities = 37/98 (37%), Positives = 58/98 (59%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK +I+ + + + G D TL R+++A M++YE + N S VA++LS +LY +R
Sbjct: 37 KKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYILYERR 96
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
FPYY V+ GLD +G +YS DPIG ++ A+
Sbjct: 97 LFPYYAEIVVGGLDEEGSH-LYSLDPIGAIIEDDYVAL 133
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG++G D TL LL+ +++++ EH +A++L +LY +RFFPYY N+LA
Sbjct: 81 IGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLA 140
Query: 432 GLDSDGKGCVYSYDPIG-HC-ARHN 500
G+ +D KG +Y+YD IG +C A H+
Sbjct: 141 GVSNDSKGVLYNYDAIGSYCEATHS 165
Score = 63.7 bits (148), Expect = 5e-09
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 100 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
R+ PY DNGG+++ + G DY ++ ADTRLS +SIYTR K+ KL++ ++
Sbjct: 30 RWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCII 81
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 72.1 bits (169), Expect = 2e-11
Identities = 29/64 (45%), Positives = 46/64 (71%)
Frame = +3
Query: 291 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 470
+++LQ ++Q++ EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSY
Sbjct: 120 SKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSY 179
Query: 471 DPIG 482
D IG
Sbjct: 180 DAIG 183
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +1
Query: 40 KMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ 219
K NE E+A P R+ PY DNGG+++ + G++Y ++ DTRLS +SIYTR+
Sbjct: 14 KKTEENEAAIEHARPSK---RWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNC 70
Query: 220 KKLFKLSESTVL 255
K+ K+++ ++
Sbjct: 71 PKISKITDKCII 82
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G TG D LTL + L+ + MYE N+ M+ A ++ST LY KRF PYY V+A
Sbjct: 50 LGLTGLIADQLTLAQKLRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVA 109
Query: 432 GLDSDGKGCVYSYDPIG 482
GLD DGK + S D IG
Sbjct: 110 GLDKDGKPYITSMDLIG 126
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 70.1 bits (164), Expect = 6e-11
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
I ATG D +++ + YE++H M+ +VA+ +S LY KRFFPYY++ ++
Sbjct: 63 ISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVG 122
Query: 432 GLDSDGKGCVYSYDPIG 482
G++S+GKG +Y YDP+G
Sbjct: 123 GINSEGKGKLYGYDPVG 139
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = +1
Query: 91 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
K+ ++ PY +GG+ + I GDDY VIGADTRLS +SI +R + ++FK++ + ++
Sbjct: 9 KKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMI 63
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +3
Query: 258 ATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGL 437
A+G D L + ++ Y + K + ++LS M+YY+R FP+Y S+++AG+
Sbjct: 100 ASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGI 159
Query: 438 DSDGKGCVYSYDPIGHCARHNF 503
DS+G+G VYSYD IG R +
Sbjct: 160 DSEGRGAVYSYDVIGSTLRTRY 181
Score = 66.9 bits (156), Expect = 6e-10
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1
Query: 58 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 237
+ PE + K F+PY DNGG+I+AIAG D+A+I DTRLS G++I +R+ +K+F +
Sbjct: 33 KKMPEVSNAPLKDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPV 92
Query: 238 SESTV 252
++ V
Sbjct: 93 TDKIV 97
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 61.3 bits (142), Expect = 3e-08
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +1
Query: 94 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
+HRF PY+DNGG+++ IAG+D+AV+ DTR G+SI +R + K+ + + ++
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILM 75
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK QI ++ G D L R+++ +YE + T A+A + S +L R
Sbjct: 43 KKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYR 102
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
+FPY V ++ G+DS+GK +YS DPIG
Sbjct: 103 YFPYLVQLLIGGIDSEGKS-IYSIDPIG 129
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/105 (24%), Positives = 58/105 (55%)
Frame = +3
Query: 198 FHIYQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 377
F I + +K +I + G + D ++++L+A ++ Y + ++ AVA++L+
Sbjct: 33 FIISKTARKVYKITDYLGLALAGLFADLQAISKILRAEIEYYNIVTGRRISVRAVARLLA 92
Query: 378 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
T+LY +++P+ ++ GL++DG +Y DP+G ++ A+
Sbjct: 93 TILYSYKYYPFLSETLVGGLEADGTAKLYVMDPLGSLIEDDYAAI 137
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G G D LT R ++ + +Y + ++ + A A+M+S+ LY RF PY++S ++A
Sbjct: 53 LGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIA 112
Query: 432 GLDSDGKGCVYSYDPIG 482
G ++DGK + + D IG
Sbjct: 113 GFEADGKPYLGAMDTIG 129
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
+K Q+ + +G G D T+ +LL R++++ ++M V ++S++LY KR
Sbjct: 42 QKTFQLTDQTFVGIAGLATDVQTMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKR 101
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
F PY+ V+AGLD D + ++D IG
Sbjct: 102 FGPYFTEPVVAGLDKDHNPFLCAFDFIG 129
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +3
Query: 345 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 452
M T A+A MLST+LYY+RFFPYY N+LAGLD +G+
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGE 36
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +3
Query: 222 KAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRF 401
KA ++ A+G D TL + ++ MY+ +K M+ ++ M+ +MLY +RF
Sbjct: 57 KAFKVTESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRF 116
Query: 402 FPYYVSNVLAGLDSDGKGCVYSYDPIG 482
P++V +V+AGLD+D + +D +G
Sbjct: 117 GPWFVDSVIAGLDTDSSPYITCFDLVG 143
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +3
Query: 243 EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSN 422
++ + TG + DT + + ++ YE + S+ + A +LS +LY KRFFPYY
Sbjct: 129 DFLLTGTGFYADTHEVYVKMVYEIRQYEVDD--SINIHSAANLLSKILYSKRFFPYYSFC 186
Query: 423 VLAGLDSDGKGCVYSYDPIG 482
VL+G + GK VYSYDPIG
Sbjct: 187 VLSGFEK-GKPYVYSYDPIG 205
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 94 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSE 243
+ RF+PY DN G+ + + D+ V+ DTR S+ I +R+ K+F++ +
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGD 129
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 56.8 bits (131), Expect = 6e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G +G D TLT L++ + +Y + + A++ M +++LY KRF PY+V ++A
Sbjct: 51 MGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVA 110
Query: 432 GLDSDGKGCVYSYDPIG 482
GLD++ + YD IG
Sbjct: 111 GLDNNNVPFIAGYDLIG 127
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 56.8 bits (131), Expect = 6e-07
Identities = 30/104 (28%), Positives = 52/104 (50%)
Frame = +3
Query: 201 HIYQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLST 380
++ + K V I ++ + G + D TLTR++ ++ YE K ++ A A++LS
Sbjct: 30 YVLSKQAKKVYKINKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSV 89
Query: 381 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
+LY + P+ + G+D G +Y DPIG N+ AV
Sbjct: 90 ILYQYKVMPFISEILFGGVDEKGPQ-LYVLDPIGSLIEDNYAAV 132
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/98 (27%), Positives = 54/98 (55%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK I + +I + G D TL ++L+ + YE E + +T ++A++LS +++ +R
Sbjct: 40 KKVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRR 99
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
F P++ ++ G+D +G + DP+G N+ A+
Sbjct: 100 FMPFFAEVLVGGIDEEGPHLIV-MDPLGSLIEDNYAAL 136
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/97 (30%), Positives = 50/97 (51%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK I I G + D L R+++ +M++ E K T VA+ LS++LY +
Sbjct: 37 KKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYK 96
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
FFP+ V ++ G+D G+ +Y DP+G ++ A
Sbjct: 97 FFPFNVEAIVGGIDPGGEPKLYVLDPLGSIIEEDYVA 133
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G G D T+ + LQ R MYE N+++ + MLS +LY +RF PY+V V+A
Sbjct: 51 VGFPGLATDNQTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVA 110
Query: 432 GLD-SDGKGCVYSYDPIG-HCARHNF 503
G+D + K V D IG C ++F
Sbjct: 111 GIDHTTSKPYVACMDLIGCVCEANDF 136
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G++G D L + L+ + ++ +N + + + S++LY +RFFP+Y N+L
Sbjct: 80 LGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILT 139
Query: 432 GLDSDGKGCVYSYDPIG 482
G++ GK Y+YD IG
Sbjct: 140 GINELGKASNYTYDAIG 156
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 52 VNENFPEYAVPGAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 228
+N N Y + +R F+PY +NGG ++AI G+ + V+ +DTR+S G+SI +R ++
Sbjct: 12 LNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRI 71
Query: 229 FKLSESTVL 255
K+S +L
Sbjct: 72 LKISNLCLL 80
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 255 GATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG 434
G G + D T+ ++ +Y + + + MLY KRF PYY+S ++AG
Sbjct: 54 GGAGLFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAG 113
Query: 435 LDSDGKGCVYSYDPIG 482
+D +G V SYD IG
Sbjct: 114 IDDNGNSYVCSYDYIG 129
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +3
Query: 276 DTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKG 455
DT L R ++ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK
Sbjct: 60 DTQVLLRKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKP 119
Query: 456 CVYSYDPIGHCA 491
+ D IG A
Sbjct: 120 YISGMDCIGSIA 131
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG +G D TL + L R ++Y+ + M A ++S +LY KRF PY+ V+A
Sbjct: 51 IGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIA 110
Query: 432 GLDSDGKGCVYSYDPIG 482
GL D + + + D IG
Sbjct: 111 GLGEDNEPFICTMDCIG 127
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG G D T+ + L+ R+ +YE + + + + M++ +LY KRF PYY V+A
Sbjct: 51 IGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIA 110
Query: 432 GLD-SDGKGCVYSYDPIG 482
GLD K + S D IG
Sbjct: 111 GLDPKTFKPFICSLDLIG 128
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G +G D TL LL+ R+ +YE M A MLS++LY RF PY+V+ ++
Sbjct: 53 VGLSGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVV 112
Query: 432 G------LDSDGKGCVYSYDP 476
G LD +GK V S++P
Sbjct: 113 GFRVQHTLDDEGKK-VCSFEP 132
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK ++ + +G G D T+ + R +YE N+++ +++M+S + Y R
Sbjct: 40 KKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHR 99
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
F Y+ ++AGLD K + D IG
Sbjct: 100 FGSYFTEPLVAGLDDTNKPYICCMDTIG 127
Score = 37.1 bits (82), Expect = 0.52
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 124 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSE 243
GG++VA+AGD+ I +D R+ + DQKK+ K+++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTD 47
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY--Y 392
KK +I + G D + L++A ++YE HN+ ++ A+A M+S +L+
Sbjct: 42 KKIFRIHDYIGVTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSL 101
Query: 393 KRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
K F PY V ++ G + D +Y+ DP G ++ A
Sbjct: 102 KAFRPYLVQLIVGGFNDDDP-ALYNLDPSGSIIEEDYTA 139
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/100 (26%), Positives = 50/100 (50%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 389
+R KK V + ++ +G D L+ +L+ +++YE + + VA +LS +L+
Sbjct: 54 RRVKKIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVASLLSNILF 113
Query: 390 YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
+FFPY V ++ G D+ + +Y+ D G + A
Sbjct: 114 SSKFFPYIVQLIVGGYDTQPR--LYTLDLFGSITEDKYTA 151
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
+K + I +I G D + R+L+A + Y+ + MTT A+A +LS +L +
Sbjct: 38 RKIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANLLSNILNENK 97
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
+FPY V ++ G + + + DP+G
Sbjct: 98 WFPYLVQIIIGGYVDE--PTIANLDPLG 123
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = +3
Query: 198 FHIYQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 377
F +++ KK QI + G D L R ++A +++Y + +M AVA +LS
Sbjct: 33 FIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLS 92
Query: 378 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
ML ++ PY V ++ G+D+ V+S D G
Sbjct: 93 NMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAG 125
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 204 IYQRPKKAVQII*EY-SIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLST 380
+Y + + I E+ +I G D L L RLL+A ++Y + K M+ A+A +L+
Sbjct: 36 VYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLAN 95
Query: 381 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
ML R PY ++ G D K +YS D +G
Sbjct: 96 MLNGARMLPYLAWFLVGGFDE--KPRLYSVDMMG 127
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG G D +L+ + + + K M + ++ST+LY KRF PY + ++A
Sbjct: 48 IGIVGLLGDIYGFKEILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVA 107
Query: 432 GLDSDGKGCVYSYDPIG 482
G +GK + + D IG
Sbjct: 108 GFTENGKPFLGTVDCIG 124
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 43.2 bits (97), Expect = 0.008
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
IG G D + + L+ ++ +YE + + + M++ LY K F PYY V+A
Sbjct: 51 IGLAGLATDVQRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIA 110
Query: 432 GLD 440
GLD
Sbjct: 111 GLD 113
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 276 DTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKG 455
D L ++++A + +Y+ +N ++ A A + + +L R P YV +L G+D D K
Sbjct: 59 DAQNLMKIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KP 114
Query: 456 CVYSYDPIG 482
+YS DP G
Sbjct: 115 SLYSLDPAG 123
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 42.7 bits (96), Expect = 0.011
Identities = 25/105 (23%), Positives = 49/105 (46%)
Frame = +3
Query: 198 FHIYQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 377
F + + +K QI G D L+ + A ++ + + + + +VA+M+S
Sbjct: 28 FLVSKNTRKTFQITPYVGAACAGLVADMQILSLQISALAKIRKMDLKRDIPPNSVAKMMS 87
Query: 378 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
M+Y +RFFP ++ G+ G+ +Y+ D +G + AV
Sbjct: 88 NMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAV 130
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 42.7 bits (96), Expect = 0.011
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 IGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 431
+G TG D T + + R +MY+ + + A A ++S+MLY RF P++V V+
Sbjct: 51 MGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIG 110
Query: 432 GLD-SDGKGCVYSYDPIG 482
+D G+ + + D IG
Sbjct: 111 TIDRKTGEVYLCATDLIG 128
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 42.3 bits (95), Expect = 0.014
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
KK +I ++ G D + RLL A ++Y+ +++ A A +LS +L+ R
Sbjct: 38 KKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSR 97
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
FP+ ++ G D ++S DP+G
Sbjct: 98 MFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 41.9 bits (94), Expect = 0.018
Identities = 26/105 (24%), Positives = 48/105 (45%)
Frame = +3
Query: 198 FHIYQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS 377
F + + KK I + G D L+ + A ++ + E + + VA+M+S
Sbjct: 32 FLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKMMS 91
Query: 378 TMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
M+Y +R+FP ++ G+ K +Y+ DP+G + AV
Sbjct: 92 NMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAV 134
>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome beta subunit -
Pyrobaculum aerophilum
Length = 202
Score = 40.3 bits (90), Expect = 0.056
Identities = 22/101 (21%), Positives = 48/101 (47%)
Frame = +3
Query: 207 YQRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 386
++R +K +I + +G D ++ L R Y+ E+ + + A+ +S +L
Sbjct: 29 HKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRAHEYKIEYKRPIPISALVNYMSLIL 88
Query: 387 YYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRA 509
+Y R + Y V +++ G+D + +Y D +G + + A
Sbjct: 89 FYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGTVTKEKYIA 129
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 39.5 bits (88), Expect = 0.098
Identities = 25/98 (25%), Positives = 42/98 (42%)
Frame = +3
Query: 219 KKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR 398
+K I IG G D + R L+ + YE + + + +A++LS +LY +
Sbjct: 49 RKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSYK 108
Query: 399 FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAV 512
P V+ G D G +Y DP+G + A+
Sbjct: 109 LAPLMTEVVVGGFDEKGPQ-IYVLDPVGSLIEDKYVAL 145
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 38.3 bits (85), Expect = 0.23
Identities = 22/91 (24%), Positives = 45/91 (49%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 389
+R +K + I + +G D + ++L+ +++ E ++M A +LS +LY
Sbjct: 30 KRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAANLLSHLLY 89
Query: 390 YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 482
RF+ + ++AG + + +YS D IG
Sbjct: 90 QNRFYLNPLGLLIAGPINSKEFGIYSLDGIG 120
>UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 236
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +1
Query: 79 VPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTV 252
+ G +QH P GGS++A+ + ++G DT S G ++ KK+ ++S++T+
Sbjct: 7 ISGEQQHTTSPVV-TGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTI 63
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 276 DTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDG 449
D +++++A + ++++++K ++T A A + L Y R PY V ++AG+D DG
Sbjct: 54 DRSQFSKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDG 112
>UniRef50_A5K4P8 Cluster: SMC family, C-terminal domain containing
protein; n=1; Plasmodium vivax|Rep: SMC family,
C-terminal domain containing protein - Plasmodium vivax
Length = 1216
Score = 36.7 bits (81), Expect = 0.69
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 560 LKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIYTGDFHLTF*SSLQMVFKKRILNFRK 739
L+N+ N + L R+ AL + + + LQKR Y F +S++ ++RILN+++
Sbjct: 460 LQNLANANKQLLMRKYALQTEHASLVEKLQKRQNYQNIQEEKFLNSIEFTLRERILNYKR 519
Query: 740 GLIWLQKNNQIFS 778
+ + + +++ S
Sbjct: 520 DIKSIVRTHRLLS 532
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +1
Query: 124 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 246
G +IV +A +D V+GADTR + G + +D +K+ +LS++
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDN 81
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 35.1 bits (77), Expect = 2.1
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 213 RPKKAVQII*EYSIGA-TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY 389
R K ++I Y +G +GC D RLL ++Y + + ++ A +++LS M+
Sbjct: 102 RVNKVIEIN-PYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMC 160
Query: 390 YKRFFPYYVSNVLAGLDSDGKGCVY 464
R + +++ G D G G Y
Sbjct: 161 QYRGMGLSMGSMICGWDKKGPGLYY 185
>UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 91 KQHRFEPYADNGGSIVAIAGDDYAVIGAD 177
+Q + Y +NGGS VAIAG DY VI A+
Sbjct: 38 QQANWSSYNNNGGSCVAIAGADYCVITAE 66
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 88 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 246
A HR P A +I+A+ D V+GAD+R STG + R K+ + E+
Sbjct: 37 ATTHRAPPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICEN 89
>UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 248
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 91 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL 255
K H P G S++ I D V+ AD +S G D +++FK++ESTV+
Sbjct: 20 KHHTMTPIC-TGTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVM 73
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGA-TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 386
Q KK ++I Y +G G D RLL + ++YE + + ++ A +++L+ M+
Sbjct: 33 QTVKKVIEIN-PYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMV 91
Query: 387 YYKRFFPYYVSNVLAGLDSDGKGCVY 464
Y + + ++ G D G G Y
Sbjct: 92 YQYKGMGLSMGTMICGWDKRGPGLYY 117
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGA-TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 386
Q KK ++I Y +G G D RLL + ++YE + + ++ A +++L+ M+
Sbjct: 97 QTVKKVIEIN-PYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMV 155
Query: 387 YYKRFFPYYVSNVLAGLDSDGKGCVY 464
Y + + ++ G D G G Y
Sbjct: 156 YQYKGMGLSMGTMVCGWDKRGPGLYY 181
>UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG24113;
n=2; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24113 - Caenorhabditis
briggsae
Length = 388
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = -2
Query: 207 IYGKSSAETSVCSDNGIIIAGDGYNTTSVVRVGLETMLFRTRHSIFRKVLVNAQH 43
+YG+S+ + S GI++ D Y+T+ VVR E ++ +++ ++ +K+L++ Q+
Sbjct: 283 LYGESAIDDSTIE--GILLVADMYDTSIVVRKCEEFLMEKSKKNLKKKLLLSTQY 335
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 33.9 bits (74), Expect = 4.9
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGA-TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 386
Q KK +QI ++ +G G D R+L ++YE + + ++ ++M++ +
Sbjct: 108 QEVKKIIQIN-DFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIF 166
Query: 387 YYKRFFPYYVSNVLAGLDSDGKGCVY 464
++ R + ++AG D DG Y
Sbjct: 167 FHYRAYDLSAGIMIAGFDKDGPHLYY 192
>UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 204
Score = 33.9 bits (74), Expect = 4.9
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 312 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 458
++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC
Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89
>UniRef50_Q55DD5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1536
Score = 33.5 bits (73), Expect = 6.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 512 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALGSSEGCVHQWLQKRDIY 664
G +Q P L +Q+ AP A G S G VHQW +K DI+
Sbjct: 412 GDIQSQSPPYLQIDSLFGYLQSFDIAPTGECMAFGDSGGLVHQWAEKEDIH 462
>UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffithsia
japonica|Rep: Proteasome chain protein - Griffithsia
japonica (Red alga)
Length = 187
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 127 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLERLAAGV 276
GSI+A+ G DY +I AD + + D K+ +L E + AAGV
Sbjct: 3 GSIIALQGADYVLIAADVSCARSIVVMKDDMDKIRQLDEGKLF--AAAGV 50
>UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus lucimarinus CCE9901
Length = 246
Score = 33.1 bits (72), Expect = 8.5
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 124 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLER 261
G +IVA V+GAD+R+STG + R K+ L++ T++ R
Sbjct: 17 GTTIVACEYAGGVVLGADSRVSTGIYVSNRASDKMCALNDRTIMCR 62
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 33.1 bits (72), Expect = 8.5
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 QRPKKAVQII*EYSIGA-TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 386
Q KK ++I Y +G G D R L + +++E + + ++ +++L+ ML
Sbjct: 86 QSVKKIIEIN-PYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANML 144
Query: 387 YYKRFFPYYVSNVLAGLDSDGKGCVY 464
Y R V ++AG D G G Y
Sbjct: 145 YSYRGMGLSVGTMIAGWDETGPGLYY 170
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,140,863
Number of Sequences: 1657284
Number of extensions: 17763201
Number of successful extensions: 46345
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 44459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46327
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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