Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40204
(833 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 51 3e-05
UniRef50_A5AZQ2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q6ZSH4 Cluster: CDNA FLJ45526 fis, clone BRTHA2027227; ... 36 1.7
UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whol... 35 2.9
UniRef50_UPI00005A14F3 Cluster: PREDICTED: similar to RUN and SH... 34 3.8
UniRef50_UPI00004983AB Cluster: hypothetical protein 113.t00006;... 34 3.8
UniRef50_A3C0S3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_UPI0000DD7F72 Cluster: PREDICTED: hypothetical protein;... 34 5.1
UniRef50_A3EQV6 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q5KC87 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_P50901 Cluster: Homeobox protein HOX3; n=2; Branchiosto... 34 5.1
UniRef50_UPI0000EBD007 Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_UPI0000DB6D8C Cluster: PREDICTED: similar to sine oculi... 33 6.7
UniRef50_UPI0000DD7B21 Cluster: PREDICTED: hypothetical protein;... 33 8.8
UniRef50_Q5GWS2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q7R5L9 Cluster: GLP_487_70031_70855; n=1; Giardia lambl... 33 8.8
UniRef50_Q4Q3Y6 Cluster: Calpain protease-like protein; n=3; Lei... 33 8.8
UniRef50_Q5A9Z4 Cluster: Potential a-factor pheromone receptor; ... 33 8.8
UniRef50_Q4PEH7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -2
Query: 760 DLHRVAGKKWMRRAADRAQWCGLGEAYVQQWTTVG 656
DL +VAG WM+ A DR+ W LGEA+VQQWT+ G
Sbjct: 463 DLVKVAGSTWMQAAQDRSLWKSLGEAFVQQWTSFG 497
>UniRef50_A5AZQ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1336
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 641 HH--HSTAHSRPLLDIGLSQSAPLSPVCGSPHPLLAGHPVEVMHHL 772
HH H PL + L AP VCG H L+ GHP ++ H L
Sbjct: 67 HHPRHDDLLHAPLRQVLLKARAPERAVCGLLHHLVGGHPPDLRHQL 112
>UniRef50_Q6ZSH4 Cluster: CDNA FLJ45526 fis, clone BRTHA2027227;
n=1; Homo sapiens|Rep: CDNA FLJ45526 fis, clone
BRTHA2027227 - Homo sapiens (Human)
Length = 292
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 658 PQSSTAGHRPLPIRT-TEPGLRLSSSTSCRPPCG 756
PQS++ GH PLP+ T T P + CRP CG
Sbjct: 188 PQSASRGHLPLPLPTPTTPCISQPPGRRCRPHCG 221
>UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14696, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1835
Score = 34.7 bits (76), Expect = 2.9
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 824 SEWRPVPE-DRNRGTPPWLGGA*PPQGGRQEVDE--ESRRPGSVVR 696
+EW PE +RGTP WLGG P G + EV E P S+ R
Sbjct: 872 NEWGNGPEASTSRGTPGWLGGPMPTVGQKDEVSNGWEEPSPESIRR 917
>UniRef50_UPI00005A14F3 Cluster: PREDICTED: similar to RUN and SH3
domain containing protein 1 (New molecule containing SH3
at the carboxy-terminus) (Nesca); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to RUN and SH3 domain
containing protein 1 (New molecule containing SH3 at the
carboxy-terminus) (Nesca) - Canis familiaris
Length = 864
Score = 34.3 bits (75), Expect = 3.8
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 658 PQSSTAGHRPLPIR--TTEPGLRLSSSTSCRP-PCGGHAPPSQGGVPRLRS 801
P S + G P P R TT LR S + P P G H+PP++G +P L S
Sbjct: 342 PPSGSLGGSPAPPREVTTFKELRSRSRATPPPSPVGAHSPPARGALPCLAS 392
>UniRef50_UPI00004983AB Cluster: hypothetical protein 113.t00006;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 113.t00006 - Entamoeba histolytica HM-1:IMSS
Length = 601
Score = 34.3 bits (75), Expect = 3.8
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 439 IKLFNATSNKM--SSITLIDVCQVILKSTTSLAVLNTMTALVLTYNCCHRNLDWIDE 275
IK FN+T N+M S++ + + ++ILK+T L++ N + L L CC D+ D+
Sbjct: 168 IKYFNSTINQMRKSNMNMHILFKIILKNTIHLSLSNYIILLKLQQLCCLEIYDFRDK 224
>UniRef50_A3C0S3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 140
Score = 34.3 bits (75), Expect = 3.8
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 670 TAGHRPLPIRTTEPGLRLSSSTSCRPPCGGHA-PPSQG-GVPRLR 798
+A R P RTT P R +SST+ P A P S G GVPR++
Sbjct: 61 SAARRWAPCRTTAPAARSTSSTASPPSAASRASPASDGDGVPRVK 105
>UniRef50_UPI0000DD7F72 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 168
Score = 33.9 bits (74), Expect = 5.1
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 658 PQSSTAGHRPLPIRTTEPGLRLSSSTSCRPP-CGGHAPPSQGGVPRL-RSSGTG 813
P+ A PLP R P + + RPP C G A P+ G RL R SG G
Sbjct: 74 PEPDGASPPPLPRRGRRPPPNSQGARALRPPNCDGRAAPAPGADGRLRRRSGAG 127
>UniRef50_A3EQV6 Cluster: Putative uncharacterized protein; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative
uncharacterized protein - Leptospirillum sp. Group II
UBA
Length = 85
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 758 PPQGGRQEVDEESRRPGSVVRIGRGLCPAVDD 663
PPQ G+QE D+E RPG + G G+ P D
Sbjct: 34 PPQHGQQEKDKEKNRPGKNKKDGLGIRPHFPD 65
>UniRef50_Q5KC87 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1404
Score = 33.9 bits (74), Expect = 5.1
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 722 SRRPGSVVRIGRGLCPAVDDCGLLNDDVF*HLFT-Q*RKCKAAFCLRVPLEFLCRIRYTA 546
SR G + I + LCP VD C + N V+ HLF + K R+ +F C T
Sbjct: 1088 SRSGGKIATITKPLCPGVDACVVDNIPVYAHLFEGRNGSGKQVLLRRLDTDFDCSYEITL 1147
Query: 545 QNTH 534
N +
Sbjct: 1148 VNAN 1151
>UniRef50_P50901 Cluster: Homeobox protein HOX3; n=2; Branchiostoma
floridae|Rep: Homeobox protein HOX3 - Branchiostoma
floridae (Florida lancelet) (Amphioxus)
Length = 411
Score = 33.9 bits (74), Expect = 5.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 644 HHSTAHSRPLLDIGLSQSAPLSPVC-GSPH----PLLAGHPVEVMHHL 772
+HS H P +GL+ S P+SP C S H P A HPV + +H+
Sbjct: 268 NHSLPHQAPPHSVGLTMSGPVSPQCYQSNHSPCPPSSAPHPVPMGNHV 315
>UniRef50_UPI0000EBD007 Cluster: PREDICTED: hypothetical protein;
n=5; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 195
Score = 33.5 bits (73), Expect = 6.7
Identities = 24/63 (38%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = +1
Query: 658 PQSSTAGHRPLPIRTTEPGLRLSSSTS-----CRPPCGGHAPPSQGGVPRLRSSGTGLHS 822
P ST GHR P + PG R S S PP G P G RL GLHS
Sbjct: 37 PPGSTLGHRS-PRHGSTPGPRAPPSASRLRGTAPPPVPGLHPRPPGSAARLHPRVPGLHS 95
Query: 823 EKP 831
P
Sbjct: 96 RPP 98
>UniRef50_UPI0000DB6D8C Cluster: PREDICTED: similar to sine oculis
homeobox homolog 3a; n=1; Apis mellifera|Rep: PREDICTED:
similar to sine oculis homeobox homolog 3a - Apis
mellifera
Length = 475
Score = 33.5 bits (73), Expect = 6.7
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 650 STAHSRPLLDIGLSQSAPLSPVCGSPH-PLLAGH--PVEVMHHLARGASHGYGLPVRVST 820
S AHS PL+ LS + PL SPH P G P +G S G GL +RV+T
Sbjct: 399 SEAHSPPLMATNLSVTGPLRVAVPSPHTPSSRGSPPPPPASQPTPQGQSQGQGL-IRVAT 457
Query: 821 RRNP 832
P
Sbjct: 458 PPPP 461
>UniRef50_UPI0000DD7B21 Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 343
Score = 33.1 bits (72), Expect = 8.8
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 688 LPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVPRLRSSGTGLH 819
LP R+ P R ++T+ RPP A P GG RLR + +G H
Sbjct: 78 LPSRSL-PSPRQKAATAARPPEPRRAAPLLGGARRLRGAQSGAH 120
>UniRef50_Q5GWS2 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 375
Score = 33.1 bits (72), Expect = 8.8
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 643 SSFNSPQSSTAGHR-PLPIRTTEPGLRLSSSTSCRPPCGGHAPPS--QGGVPR 792
S F++ + T +R P+ T PG L + TS RPPCG H P+ QG PR
Sbjct: 315 SHFDTLRVLTPDNRLPIGPGFTRPGFTLLT-TSGRPPCGSHCFPAVRQGSEPR 366
>UniRef50_Q7R5L9 Cluster: GLP_487_70031_70855; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_487_70031_70855 - Giardia lamblia
ATCC 50803
Length = 274
Score = 33.1 bits (72), Expect = 8.8
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 640 TSSFNSPQSSTAGHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVPRLRSSG 807
T+ SP SST GH P + G S ++ P GG P + G R RSSG
Sbjct: 78 TTVVTSPGSSTPGHYP------QNGSARSGGSTAGRPAGGSHPAGRSGGGRTRSSG 127
>UniRef50_Q4Q3Y6 Cluster: Calpain protease-like protein; n=3;
Leishmania|Rep: Calpain protease-like protein -
Leishmania major
Length = 1379
Score = 33.1 bits (72), Expect = 8.8
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 637 NTSSFNSPQSSTAGHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVP 789
N+S S SS +G R LP+ + P S+ C+P CG P GG P
Sbjct: 157 NSSPSPSAASSMSGKRTLPVASPTPSP--PSAPPCKPTCGSDGVP-DGGKP 204
>UniRef50_Q5A9Z4 Cluster: Potential a-factor pheromone receptor;
n=1; Candida albicans|Rep: Potential a-factor pheromone
receptor - Candida albicans (Yeast)
Length = 417
Score = 33.1 bits (72), Expect = 8.8
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -2
Query: 166 CSKRP*LLWRGTWVRFPF*ANICVINR-FVCSLSFICIFCKY-ICRY 32
C+K P LL +G+W +F IC+IN FV ++ +I +Y I +Y
Sbjct: 100 CAKHPTLLEQGSWKKFAMDMAICLINPIFVMAVHYIVTGSRYAIVKY 146
>UniRef50_Q4PEH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1097
Score = 33.1 bits (72), Expect = 8.8
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 637 NTSSFNSPQSSTAGHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVPRLRSSGTGL 816
N SS +S H P P G+R +TS RP P PR+R GL
Sbjct: 301 NRSSSTDAAASDTYHSPKPRAAQRAGIRQVPATSARPWSDQDPVPRSCSAPRIRDDSDGL 360
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,890,673
Number of Sequences: 1657284
Number of extensions: 17326196
Number of successful extensions: 48343
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 45324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48256
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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