Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40204
         (833 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          29   0.13 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   8.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   8.7  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +2

Query: 683 GLSQSAPLSPVCGSPHPLLAGH-PVEVMHHLARGASHGYGLPVRV 814
           G  Q  P   +CG+ +P+L GH  ++ +  ++   S   GLP+ V
Sbjct: 7   GARQILPEDSLCGASYPILNGHTTIQGLIEMSTSGSGSSGLPLLV 51


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 655 SPQSSTAGHRPLPIRTTEPGLRLSSSTSC 741
           SP ++      LP+R   P + L+SS+SC
Sbjct: 164 SPAAAVRSDSSLPMRHYVPHISLNSSSSC 192


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 319  LTYNCCHRNLDWIDEGASEN 260
            LTY+  H+ +  IDE  S+N
Sbjct: 2296 LTYHTFHKEIKGIDEAKSKN 2315


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 84  LFALCLLYVFFVNTYVDIVSG 22
           LF LC ++  +++TYV ++ G
Sbjct: 258 LFKLCQMFSLYLSTYVLVLVG 278


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 84  LFALCLLYVFFVNTYVDIVSG 22
           LF LC ++  +++TYV ++ G
Sbjct: 259 LFKLCQMFSLYLSTYVLVLVG 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,153
Number of Sequences: 2352
Number of extensions: 17994
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)