Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40204
         (833 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    31   2.6  
X76208-1|CAA53800.1|  518|Drosophila melanogaster protein 33-spe...    30   3.4  
K02621-1|AAA28968.1|  531|Drosophila melanogaster protein ( D.me...    30   3.4  
BT010275-1|AAQ23593.1|  421|Drosophila melanogaster RE08107p pro...    30   3.4  
AE014297-1995|AAS65155.1|  518|Drosophila melanogaster CG4898-PK...    30   3.4  
AE014296-1041|ABC66161.1|  421|Drosophila melanogaster CG33993-P...    30   3.4  
AL023874-7|CAA19643.1|  552|Drosophila melanogaster EG:100G10.1 ...    30   4.5  
AE014298-449|AAF45812.1|  552|Drosophila melanogaster CG2685-PA ...    30   4.5  
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    29   7.8  

>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 607 HFLY*VNKC*NTSSFNSPQSSTAGHRPLPIRTTEP-GLRLSSSTSCRPPCGGHAPPSQGG 783
           H  Y  N C  T  +   +S   GH     +   P  L+ S+ST    P   H PPSQGG
Sbjct: 386 HNQYGGNYCNGTDRYPRSRSQQQGHHNAAQQAHHPYQLQHSASTVSHHP-HAHGPPSQGG 444


>X76208-1|CAA53800.1|  518|Drosophila melanogaster protein
           33-specific exons protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 676 GHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVP 789
           G  P P+   E G    ++    PP  G APP++G VP
Sbjct: 399 GSEPEPVPAAE-GEAAPAAEGAAPPAEGAAPPAEGAVP 435


>K02621-1|AAA28968.1|  531|Drosophila melanogaster protein (
           D.melanogaster tropomyosingene isoform 33 (9C), exon
           10C. ).
          Length = 531

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 676 GHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVP 789
           G  P P+   E G    ++    PP  G APP++G VP
Sbjct: 412 GSEPEPVPAAE-GEAAPAAEGAAPPAEGAAPPAEGAVP 448


>BT010275-1|AAQ23593.1|  421|Drosophila melanogaster RE08107p
           protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = +2

Query: 641 HHHSTAHSRPLLDIGLSQSAPLSPVCGSPHPLLAGHPVEVMHHL 772
           HHH  AH  P       Q  P S     PHP L   PVE +H L
Sbjct: 65  HHHPPAHPHP----PRQQPHPHSHSHPHPHPQLQRRPVEQLHLL 104


>AE014297-1995|AAS65155.1|  518|Drosophila melanogaster CG4898-PK,
           isoform K protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 676 GHRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVP 789
           G  P P+   E G    ++    PP  G APP++G VP
Sbjct: 399 GSEPEPVPAAE-GEAAPAAEGAAPPAEGAAPPAEGAVP 435


>AE014296-1041|ABC66161.1|  421|Drosophila melanogaster CG33993-PA
           protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = +2

Query: 641 HHHSTAHSRPLLDIGLSQSAPLSPVCGSPHPLLAGHPVEVMHHL 772
           HHH  AH  P       Q  P S     PHP L   PVE +H L
Sbjct: 65  HHHPPAHPHP----PRQQPHPHSHSHPHPHPQLQRRPVEQLHLL 104


>AL023874-7|CAA19643.1|  552|Drosophila melanogaster EG:100G10.1
           protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 679 HRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVPRL 795
           +RP P+R   PG          PP G  AP   G +PR+
Sbjct: 405 YRPPPMRPPHPGSGFGIRMPPGPPPGPRAPHGLGPIPRM 443


>AE014298-449|AAF45812.1|  552|Drosophila melanogaster CG2685-PA
           protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 679 HRPLPIRTTEPGLRLSSSTSCRPPCGGHAPPSQGGVPRL 795
           +RP P+R   PG          PP G  AP   G +PR+
Sbjct: 405 YRPPPMRPPHPGSGFGIRMPPGPPPGPRAPHGLGPIPRM 443


>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 736 SCRPPCGGHAPPSQGGVPRLRSSGTGLH---SEKP 831
           S +PP  G  PPS G +P LR    G H   S+KP
Sbjct: 866 SQKPPNVGIYPPSTGSIPPLRPPNQGGHPPGSQKP 900


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,825,162
Number of Sequences: 53049
Number of extensions: 843291
Number of successful extensions: 2612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)