Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40203
         (841 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   1.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.9  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   5.0  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 500 LSPSSICGSLVLILSKSLVNGTATS*TDENDTNATYSNLA 381
           +SP    GS+V  +S+SL +G  ++    + TN   SN++
Sbjct: 174 ISPKLSPGSVVESVSRSLKSGNPSTAVSSSSTNNNTSNIS 213


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 754 SGYGYRRNNFPWGLIFP 804
           SGYG  RN F  G IFP
Sbjct: 112 SGYGSSRNTFLIGQIFP 128


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 706 GSCGDTIGNIRILTGYNVGRGND*INSVPSNSTNSTASIS 587
           G+C    G   IL    VGR N  IN   S S +  A +S
Sbjct: 219 GACNGDSGGPAILNNQLVGRPNFIINYCGSASPDGYAKVS 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,178
Number of Sequences: 2352
Number of extensions: 16788
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)