Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40203
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007991-1|AAH07991.1|  518|Homo sapiens chromosome 15 open read...    73   1e-12
AK027475-1|BAB55140.1|  518|Homo sapiens protein ( Homo sapiens ...    73   1e-12
BC037823-1|AAH37823.1|   86|Homo sapiens C15orf44 protein protein.     62   3e-09

>BC007991-1|AAH07991.1|  518|Homo sapiens chromosome 15 open reading
           frame 44 protein.
          Length = 518

 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 33/84 (39%), Positives = 58/84 (69%)
 Frame = +1

Query: 259 LLDVSLSMSRPVISSDSIENHTRSSIAVAAINSFLDYLSVHAKLEYVALVSFSSVHDVAV 438
           ++DVSLSM+RPV S +  E + R  +A   +    ++++ + KLE+ ALV FSS+ ++ V
Sbjct: 6   VMDVSLSMTRPV-SIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLWELMV 64

Query: 439 PFTRDFDSIRTKLPQIEEGDKTCM 510
           PFTRD+++++  L  +++ DKTC+
Sbjct: 65  PFTRDYNTLQEALSNMDDYDKTCL 88


>AK027475-1|BAB55140.1|  518|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14569 fis, clone NT2RM4000514. ).
          Length = 518

 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 33/84 (39%), Positives = 58/84 (69%)
 Frame = +1

Query: 259 LLDVSLSMSRPVISSDSIENHTRSSIAVAAINSFLDYLSVHAKLEYVALVSFSSVHDVAV 438
           ++DVSLSM+RPV S +  E + R  +A   +    ++++ + KLE+ ALV FSS+ ++ V
Sbjct: 6   VMDVSLSMTRPV-SIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLWELMV 64

Query: 439 PFTRDFDSIRTKLPQIEEGDKTCM 510
           PFTRD+++++  L  +++ DKTC+
Sbjct: 65  PFTRDYNTLQEALSNMDDYDKTCL 88


>BC037823-1|AAH37823.1|   86|Homo sapiens C15orf44 protein protein.
          Length = 86

 Score = 61.7 bits (143), Expect = 3e-09
 Identities = 28/72 (38%), Positives = 50/72 (69%)
 Frame = +1

Query: 259 LLDVSLSMSRPVISSDSIENHTRSSIAVAAINSFLDYLSVHAKLEYVALVSFSSVHDVAV 438
           ++DVSLSM+RPV S +  E + R  +A   +    ++++ + KLE+ ALV FSS+ ++ V
Sbjct: 6   VIDVSLSMTRPV-SIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLWELMV 64

Query: 439 PFTRDFDSIRTK 474
           PFTRD+++++ +
Sbjct: 65  PFTRDYNTLQVQ 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,574,618
Number of Sequences: 237096
Number of extensions: 2405526
Number of successful extensions: 7713
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7710
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)