Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40203
         (841 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118537-1|AAM49906.1|  587|Drosophila melanogaster LD26982p pro...    71   3e-12
AE014134-216|AAF51404.1|  587|Drosophila melanogaster CG4785-PA ...    71   3e-12
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f...    32   0.85 
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ...    32   0.85 
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,...    32   0.85 
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ...    32   0.85 

>AY118537-1|AAM49906.1|  587|Drosophila melanogaster LD26982p
           protein.
          Length = 587

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +1

Query: 262 LDVSLSMSRPVISSDSIENHTRSSIAVAAINSFLDYLSVHAKLEYVALVSFSSVHDVAVP 441
           LD SLSM RPV   +    HT  S+A   I   LD L+   KLE+VAL+S+S+  ++ V 
Sbjct: 7   LDASLSMLRPVPGRNE---HTYQSLATKGIQHLLDNLTAAGKLEHVALLSYSTTAELKVD 63

Query: 442 FTRDFDSIRTKLPQIEEGDKTCM 510
           FTRD+D +R  + ++E  DK C+
Sbjct: 64  FTRDYDQVRQAVKKVEPVDKACL 86


>AE014134-216|AAF51404.1|  587|Drosophila melanogaster CG4785-PA
           protein.
          Length = 587

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +1

Query: 262 LDVSLSMSRPVISSDSIENHTRSSIAVAAINSFLDYLSVHAKLEYVALVSFSSVHDVAVP 441
           LD SLSM RPV   +    HT  S+A   I   LD L+   KLE+VAL+S+S+  ++ V 
Sbjct: 7   LDASLSMLRPVPGRNE---HTYQSLATKGIQHLLDNLTAAGKLEHVALLSYSTTAELKVD 63

Query: 442 FTRDFDSIRTKLPQIEEGDKTCM 510
           FTRD+D +R  + ++E  DK C+
Sbjct: 64  FTRDYDQVRQAVKKVEPVDKACL 86


>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth factor
            protein.
          Length = 2703

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = -1

Query: 778  CFAGNRSLNX-INFPDYKGIACCKQGSCGDTIG--NIRILTGYNVGRGND*INSVPSNST 608
            C  G   +N   N  D    +C   GSC D I   N   L GY+       +N   SN  
Sbjct: 1010 CPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPC 1069

Query: 607  NSTASISYQNNRIGVWCPHSF 545
             + A+   QNN     CP  F
Sbjct: 1070 LNGATCHEQNNEYTCHCPSGF 1090


>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
            protein protein.
          Length = 2703

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = -1

Query: 778  CFAGNRSLNX-INFPDYKGIACCKQGSCGDTIG--NIRILTGYNVGRGND*INSVPSNST 608
            C  G   +N   N  D    +C   GSC D I   N   L GY+       +N   SN  
Sbjct: 1010 CPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPC 1069

Query: 607  NSTASISYQNNRIGVWCPHSF 545
             + A+   QNN     CP  F
Sbjct: 1070 LNGATCHEQNNEYTCHCPSGF 1090


>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
            EG:140G11.1,FBgn0004647;N protein.
          Length = 2704

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = -1

Query: 778  CFAGNRSLNX-INFPDYKGIACCKQGSCGDTIG--NIRILTGYNVGRGND*INSVPSNST 608
            C  G   +N   N  D    +C   GSC D I   N   L GY+       +N   SN  
Sbjct: 1010 CPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPC 1069

Query: 607  NSTASISYQNNRIGVWCPHSF 545
             + A+   QNN     CP  F
Sbjct: 1070 LNGATCHEQNNEYTCHCPSGF 1090


>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
            protein.
          Length = 2703

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = -1

Query: 778  CFAGNRSLNX-INFPDYKGIACCKQGSCGDTIG--NIRILTGYNVGRGND*INSVPSNST 608
            C  G   +N   N  D    +C   GSC D I   N   L GY+       +N   SN  
Sbjct: 1010 CPLGFSGINCQTNDEDCTESSCLNGGSCIDGINGYNCSCLAGYSGANCQYKLNKCDSNPC 1069

Query: 607  NSTASISYQNNRIGVWCPHSF 545
             + A+   QNN     CP  F
Sbjct: 1070 LNGATCHEQNNEYTCHCPSGF 1090


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,614,630
Number of Sequences: 53049
Number of extensions: 709627
Number of successful extensions: 1425
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)