Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40202
(831 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035967-1|AAH35967.2| 397|Homo sapiens RG9MTD1 protein protein. 47 7e-05
AY561707-1|AAS66980.1| 397|Homo sapiens HBV pre-S2 trans-regula... 47 7e-05
AK000439-1|BAA91166.1| 252|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AF226052-1|AAF86952.1| 403|Homo sapiens HNYA protein. 47 7e-05
BC057774-1|AAH57774.1| 316|Homo sapiens RNA (guanine-9-) methyl... 37 0.10
AL138752-9|CAI13882.1| 221|Homo sapiens RNA (guanine-9-) methyl... 37 0.10
AL138752-8|CAI13881.1| 316|Homo sapiens RNA (guanine-9-) methyl... 37 0.10
AK092718-1|BAC03957.1| 221|Homo sapiens protein ( Homo sapiens ... 37 0.10
AK056017-1|BAB71074.1| 319|Homo sapiens protein ( Homo sapiens ... 37 0.10
BC028373-1|AAH28373.1| 339|Homo sapiens RNA (guanine-9-) methyl... 35 0.42
AF106046-1|AAD21019.1| 233|Homo sapiens unknown protein. 32 2.2
U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome ... 31 5.1
U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking reg... 31 5.1
U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking reg... 31 5.1
>BC035967-1|AAH35967.2| 397|Homo sapiens RG9MTD1 protein protein.
Length = 397
Score = 47.2 bits (107), Expect = 7e-05
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 18 AMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQ 197
AM Q LV D +YE +M +E N Q+ G NR + +PF+I+ CN+ D ++
Sbjct: 192 AMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRE 251
Query: 198 LKKNIPCMEEPW 233
L K +E W
Sbjct: 252 LVKR---YQEKW 260
Score = 45.2 bits (102), Expect = 3e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 257 SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
S++D+FP++ ++YLT N +T F D +Y+IG VDK
Sbjct: 271 SHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDK 309
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 625 SLAKAKKDNITMAKLPLDRYLEWAPGSR 708
SLAKAK+ N+ LPLD+YL+W G++
Sbjct: 316 SLAKAKRLNLATECLPLDKYLQWEIGNK 343
>AY561707-1|AAS66980.1| 397|Homo sapiens HBV pre-S2 trans-regulated
protein 2 protein.
Length = 397
Score = 47.2 bits (107), Expect = 7e-05
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 18 AMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQ 197
AM Q LV D +YE +M +E N Q+ G NR + +PF+I+ CN+ D ++
Sbjct: 192 AMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRE 251
Query: 198 LKKNIPCMEEPW 233
L K +E W
Sbjct: 252 LVKR---YQEKW 260
Score = 45.2 bits (102), Expect = 3e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 257 SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
S++D+FP++ ++YLT N +T F D +Y+IG VDK
Sbjct: 271 SHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDK 309
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 625 SLAKAKKDNITMAKLPLDRYLEWAPGSR 708
SLAKAK+ N+ LPLD+YL+W G++
Sbjct: 316 SLAKAKRLNLATECLPLDKYLQWEIGNK 343
>AK000439-1|BAA91166.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ20432 fis, clone KAT03764. ).
Length = 252
Score = 47.2 bits (107), Expect = 7e-05
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 18 AMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQ 197
AM Q LV D +YE +M +E N Q+ G NR + +PF+I+ CN+ D ++
Sbjct: 47 AMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRE 106
Query: 198 LKKNIPCMEEPW 233
L K +E W
Sbjct: 107 LVKR---YQEKW 115
Score = 45.2 bits (102), Expect = 3e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 257 SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
S++D+FP++ ++YLT N +T F D +Y+IG VDK
Sbjct: 126 SHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDK 164
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 625 SLAKAKKDNITMAKLPLDRYLEWAPGSR 708
SLAKAK+ N+ LPLD+YL+W G++
Sbjct: 171 SLAKAKRLNLATECLPLDKYLQWEIGNK 198
>AF226052-1|AAF86952.1| 403|Homo sapiens HNYA protein.
Length = 403
Score = 47.2 bits (107), Expect = 7e-05
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +3
Query: 18 AMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQ 197
AM Q LV D +YE +M +E N Q+ G NR + +PF+I+ CN+ D ++
Sbjct: 198 AMQFGQPLVFDMAYENYMKRKELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDGALHRE 257
Query: 198 LKKNIPCMEEPW 233
L K +E W
Sbjct: 258 LVKR---YQEKW 266
Score = 45.2 bits (102), Expect = 3e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 257 SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
S++D+FP++ ++YLT N +T F D +Y+IG VDK
Sbjct: 277 SHVDLFPKDSIIYLTADSPNVMTTFRHDKVYVIGSFVDK 315
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 625 SLAKAKKDNITMAKLPLDRYLEWAPGSR 708
SLAKAK+ N+ LPLD+YL+W G++
Sbjct: 322 SLAKAKRLNLATECLPLDKYLQWEIGNK 349
>BC057774-1|AAH57774.1| 316|Homo sapiens RNA (guanine-9-)
methyltransferase domain containing 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 269 IFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
+FP E LVYLTP + L D + +YI+G +VD+
Sbjct: 202 LFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDE 236
>AL138752-9|CAI13882.1| 221|Homo sapiens RNA (guanine-9-)
methyltransferase domain containing 3 protein.
Length = 221
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 269 IFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
+FP E LVYLTP + L D + +YI+G +VD+
Sbjct: 107 LFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDE 141
>AL138752-8|CAI13881.1| 316|Homo sapiens RNA (guanine-9-)
methyltransferase domain containing 3 protein.
Length = 316
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 269 IFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
+FP E LVYLTP + L D + +YI+G +VD+
Sbjct: 202 LFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDE 236
>AK092718-1|BAC03957.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ35399 fis, clone SKNSH2004039. ).
Length = 221
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 269 IFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
+FP E LVYLTP + L D + +YI+G +VD+
Sbjct: 107 LFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDE 141
>AK056017-1|BAB71074.1| 319|Homo sapiens protein ( Homo sapiens
cDNA FLJ31455 fis, clone NT2NE2001156. ).
Length = 319
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 269 IFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVDK 373
+FP E LVYLTP + L D + +YI+G +VD+
Sbjct: 202 LFPLETLVYLTPDSEHALEDVDLNKVYILGGLVDE 236
>BC028373-1|AAH28373.1| 339|Homo sapiens RNA (guanine-9-)
methyltransferase domain containing 2 protein.
Length = 339
Score = 34.7 bits (76), Expect = 0.42
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 21 MMHSQ-SLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQ 197
++HS L+IDCS++ MV ++ KQ+ + +NR P +L + Q
Sbjct: 96 VVHSTLRLIIDCSFDHLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGG------Q 149
Query: 198 LKKNIPCMEEPWFP-MNIHTK 257
LKKN+ ++ W +IH K
Sbjct: 150 LKKNMDENDKGWVNWKDIHIK 170
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 260 YLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
Y ++ +E L+YLT N L D Y+IG +VD
Sbjct: 174 YSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLVD 210
>AF106046-1|AAD21019.1| 233|Homo sapiens unknown protein.
Length = 233
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 260 YLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
Y ++ +E L+YLT N L D Y+IG +VD
Sbjct: 68 YSELIKKEDLIYLTSDSPNILKELDESKAYVIGGLVD 104
>U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome
protein short isoform protein.
Length = 1531
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 42 VIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLK 203
++ S E ++W+ A Q VFG++RLH H+CN+ + Q K
Sbjct: 677 ILPSSGSEDLLWKWDALKAYQ-NFVFGEDRLHSIQIANHICNLIQKGNIVVQWK 729
>U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking
regulator LYST protein.
Length = 1475
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 42 VIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLK 203
++ S E ++W+ A Q VFG++RLH H+CN+ + Q K
Sbjct: 677 ILPSSGSEDLLWKWDALKAYQ-NFVFGEDRLHSIQIANHICNLIQKGNIVVQWK 729
>U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking
regulator protein.
Length = 2001
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 42 VIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLK 203
++ S E ++W+ A Q VFG++RLH H+CN+ + Q K
Sbjct: 677 ILPSSGSEDLLWKWDALKAYQ-NFVFGEDRLHSIQIANHICNLIQKGNIVVQWK 729
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,857,615
Number of Sequences: 237096
Number of extensions: 2356570
Number of successful extensions: 3381
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3381
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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