Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40202
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119619-1|AAM50273.1|  446|Drosophila melanogaster LD44982p pro...    91   1e-18
AE013599-2706|AAF57683.1|  446|Drosophila melanogaster CG5190-PA...    91   1e-18
AY089688-1|AAL90426.1|  319|Drosophila melanogaster RH65902p pro...    37   0.029
AE014298-3180|AAF50950.1|  319|Drosophila melanogaster CG14618-P...    37   0.029
BT023773-1|AAZ41781.1|  458|Drosophila melanogaster LD42725p pro...    29   7.8  
AY052058-1|AAK93482.1|  529|Drosophila melanogaster LP08674p pro...    29   7.8  
AE013599-431|AAF59243.2|  586|Drosophila melanogaster CG1620-PA ...    29   7.8  

>AY119619-1|AAM50273.1|  446|Drosophila melanogaster LD44982p
           protein.
          Length = 446

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = +3

Query: 6   RALLAMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSE 185
           R   AM  +  +V+DCSY+EHM  RE   AAKQ+ + F +NR++ EPF++H CN   DS 
Sbjct: 182 RLTRAMQFAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSR 241

Query: 186 FLKQLKKNIPCMEEPWFPMNIHTKAI*IFFQEKS 287
            ++ L++ IP M  P FP+N+H+K     F +++
Sbjct: 242 CMQSLQRYIPTMHNPEFPINLHSKCFTELFPKQN 275



 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 212 SMHGRTLVPNEYSY*SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
           +MH      N +S   + ++FP++ LVYLTPHCR +L  ++PD IYI+G MVD
Sbjct: 252 TMHNPEFPINLHSK-CFTELFPKQNLVYLTPHCREDLVTYNPDDIYIVGAMVD 303



 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +1

Query: 610 NNEPISLAKAKKDNITMAKLPLDRYLEWAPGSRKT*TL 723
           NNEP+SLAKAK+  + MA+LPLDRYL+W  GS K+ TL
Sbjct: 306 NNEPLSLAKAKRLGLRMARLPLDRYLQWGSGSGKSLTL 343



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 693 GSWIKENLNINHMIPILLDLKLTAIGDMHYGHIP*KEI 806
           GS   ++L +N MI I+LDLK T   D    H+P +++
Sbjct: 334 GSGSGKSLTLNQMINIMLDLKKTGDWDTALKHVPRRKV 371


>AE013599-2706|AAF57683.1|  446|Drosophila melanogaster CG5190-PA
           protein.
          Length = 446

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 39/94 (41%), Positives = 60/94 (63%)
 Frame = +3

Query: 6   RALLAMMHSQSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSE 185
           R   AM  +  +V+DCSY+EHM  RE   AAKQ+ + F +NR++ EPF++H CN   DS 
Sbjct: 182 RLTRAMQFAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSR 241

Query: 186 FLKQLKKNIPCMEEPWFPMNIHTKAI*IFFQEKS 287
            ++ L++ IP M  P FP+N+H+K     F +++
Sbjct: 242 CMQSLQRYIPTMHNPEFPINLHSKCFTELFPKQN 275



 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 212 SMHGRTLVPNEYSY*SYLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
           +MH      N +S   + ++FP++ LVYLTPHCR +L  ++PD IYI+G MVD
Sbjct: 252 TMHNPEFPINLHSK-CFTELFPKQNLVYLTPHCREDLVTYNPDDIYIVGAMVD 303



 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +1

Query: 610 NNEPISLAKAKKDNITMAKLPLDRYLEWAPGSRKT*TL 723
           NNEP+SLAKAK+  + MA+LPLDRYL+W  GS K+ TL
Sbjct: 306 NNEPLSLAKAKRLGLRMARLPLDRYLQWGSGSGKSLTL 343



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 693 GSWIKENLNINHMIPILLDLKLTAIGDMHYGHIP*KEI 806
           GS   ++L +N MI I+LDLK T   D    H+P +++
Sbjct: 334 GSGSGKSLTLNQMINIMLDLKKTGDWDTALKHVPRRKV 371


>AY089688-1|AAL90426.1|  319|Drosophila melanogaster RH65902p
           protein.
          Length = 319

 Score = 37.1 bits (82), Expect = 0.029
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 36  SLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLKKN 209
           S+ ID  Y++ M  R+ +   KQ   ++  NR   +P N+H   +  +    +  KKN
Sbjct: 96  SVAIDLDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESFKKN 153



 Score = 33.1 bits (72), Expect = 0.48
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 260 YLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
           + DIF   +LVYLT      L +  P   Y+IG +VD
Sbjct: 169 HTDIFEHSQLVYLTCESDRVLDKLQPGCTYVIGGLVD 205


>AE014298-3180|AAF50950.1|  319|Drosophila melanogaster CG14618-PA
           protein.
          Length = 319

 Score = 37.1 bits (82), Expect = 0.029
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 36  SLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLKKN 209
           S+ ID  Y++ M  R+ +   KQ   ++  NR   +P N+H   +  +    +  KKN
Sbjct: 96  SVAIDLDYDDLMQERDIVKCVKQCLRIYTINRRSPQPGNLHFTGIRRNGHIHESFKKN 153



 Score = 33.1 bits (72), Expect = 0.48
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 260 YLDIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
           + DIF   +LVYLT      L +  P   Y+IG +VD
Sbjct: 169 HTDIFEHSQLVYLTCESDRVLDKLQPGCTYVIGGLVD 205


>BT023773-1|AAZ41781.1|  458|Drosophila melanogaster LD42725p
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 LDIFPREKLVYLTPHCRNELTRFDP 337
           LD++P E  V L P C  E  RF P
Sbjct: 225 LDLYPDESFVDLAPTCGEETERFTP 249


>AY052058-1|AAK93482.1|  529|Drosophila melanogaster LP08674p
           protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 LDIFPREKLVYLTPHCRNELTRFDP 337
           LD++P E  V L P C  E  RF P
Sbjct: 167 LDLYPDESFVDLAPTCGEETERFTP 191


>AE013599-431|AAF59243.2|  586|Drosophila melanogaster CG1620-PA
           protein.
          Length = 586

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 LDIFPREKLVYLTPHCRNELTRFDP 337
           LD++P E  V L P C  E  RF P
Sbjct: 224 LDLYPDESFVDLAPTCGEETERFTP 248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,172,942
Number of Sequences: 53049
Number of extensions: 705535
Number of successful extensions: 1141
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)