Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40202
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical p... 35 0.082
Z92828-6|CAB07338.2| 393|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 31 1.3
U23177-6|AAA64330.1| 318|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical... 28 9.4
>U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical
protein F46F11.10 protein.
Length = 390
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 281 EKLVYLTPHCRNELTRFDPDAIYIIGCMVDKV 376
+ ++YL+P EL D D IY+IG +VD+V
Sbjct: 252 KNVIYLSPDATEELESVDDDKIYVIGGIVDRV 283
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 39 LVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLKKN 209
L +DC + + R A Q+ + +NR + +PF +H N ++ + ++ L+K+
Sbjct: 168 LAVDCQFLSRLSPRGRGLTALQLQYLITENRRNPDPFRLHFVNYDSKNSSIQDLEKS 224
>Z92828-6|CAB07338.2| 393|Caenorhabditis elegans Hypothetical
protein C37A5.7 protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 33 QSLVIDCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDSEFLKQLKKNI 212
+ ++DC + + N QM + +N L PF+I+ N D + + K+N+
Sbjct: 151 RKFIVDCRFLRDFSVKTQANYTNQMQQLHDENWLSNRPFSINFANYQADQQLVDIAKRNL 210
>Z69360-9|CAN86601.1| 296|Caenorhabditis elegans Hypothetical
protein F25H8.1b protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 266 DIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
++F E++VYLT N L+ D +Y+IG +VD
Sbjct: 159 NLFKPEEIVYLTSESENVLSDLDDTKVYVIGGIVD 193
>Z69360-8|CAA93284.1| 297|Caenorhabditis elegans Hypothetical
protein F25H8.1a protein.
Length = 297
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 266 DIFPREKLVYLTPHCRNELTRFDPDAIYIIGCMVD 370
++F E++VYLT N L+ D +Y+IG +VD
Sbjct: 160 NLFKPEEIVYLTSESENVLSDLDDTKVYVIGGIVD 194
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 75 WRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNNDS-EFLKQLKKNI 212
W ET N+ +++ +NRL EP I + V NDS +K ++ I
Sbjct: 145 WTETSNSTDNENMIYYENRLLGEP-RIRMLKVTNDSCTVMKSFQREI 190
>U23177-6|AAA64330.1| 318|Caenorhabditis elegans Hypothetical
protein C56G2.3 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 625 SLAKAKKDNITMAKLPLDRYLEWAPG 702
+L+ A++ NI +LP+ RY++W G
Sbjct: 221 ALSAARRANIRAYRLPIHRYVKWKSG 246
>Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 51 CSYEEHMVWRET-LNAAKQMTLV-FGDNRLHK--EPFNIHLCNVNNDSEFLKQLK 203
C YE + ET LN ++ +V G H N+H+C++NN+ ++ K K
Sbjct: 287 CRYETKSNYTETYLNETEEEKMVKLGSLITHNCCPSNNMHICDLNNERKYQKMAK 341
>Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 51 CSYEEHMVWRET-LNAAKQMTLV-FGDNRLHK--EPFNIHLCNVNNDSEFLKQLK 203
C YE + ET LN ++ +V G H N+H+C++NN+ ++ K K
Sbjct: 287 CRYETKSNYTETYLNETEEEKMVKLGSLITHNCCPSNNMHICDLNNERKYQKMAK 341
>AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical
protein F44E7.8 protein.
Length = 417
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 604 QTNNEPISLAKAKKDNITMAKLPLDRYLEWAPGSRKT 714
Q N + IS K+ + +D Y +W+PGS+K+
Sbjct: 98 QWNRDMISSTDRKRQSEEDDATDVDAYSDWSPGSKKS 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,842,006
Number of Sequences: 27780
Number of extensions: 390386
Number of successful extensions: 834
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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