Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40202
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.6  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   6.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 48  DCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNND 179
           D +    ++  E  N  K   +     RL+ +PFN H+  +N D
Sbjct: 467 DTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHI-TINAD 509


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 48  DCSYEEHMVWRETLNAAKQMTLVFGDNRLHKEPFNIHLCNVNND 179
           D +    ++  E  N  K   +     RL+ +PFN H+  +N D
Sbjct: 467 DTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHI-TINAD 509


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 221 GRTLVPNEYSY*SYLDIFPREKLVYLTPHC 310
           G TL  N Y Y S  D   R KL  +  HC
Sbjct: 60  GVTLAGNRYIYLSGTDRVIRAKLGKVGVHC 89


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 129 CCLQILMSFALQHLKFLSKPCVLHKNSQ*PVTDCAS 22
           C LQ   +  + H     K  ++ KN Q  +TD  S
Sbjct: 166 CALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGS 201


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = -2

Query: 194 FQEFTIIVYITQVNIEW 144
           +Q++  ++ + Q+N+EW
Sbjct: 171 YQQYLRLLEVPQINLEW 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,839
Number of Sequences: 438
Number of extensions: 5371
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)