Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40200
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 148 1e-36
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 86 5e-18
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 79 8e-16
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 77 4e-15
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 73 4e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 70 5e-13
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 69 1e-12
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 66 4e-12
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 66 6e-12
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 60 5e-10
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 59 7e-10
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 55 1e-08
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 50 5e-07
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.038
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 28 1.9
SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces ... 27 3.3
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 3.3
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 7.6
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 7.6
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 148 bits (358), Expect = 1e-36
Identities = 64/96 (66%), Positives = 76/96 (79%)
Frame = +1
Query: 223 FCREAYEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFH 402
F + + S L+LM W+ IPGK T WEGGLYKL M F ++YP+ PPKC+F PPLFH
Sbjct: 24 FYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFH 83
Query: 403 PNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 510
PNVYPSGTVCLS+L+EE+ W+PAITIKQILLGIQDL
Sbjct: 84 PNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDL 119
Score = 51.2 bits (117), Expect = 2e-07
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 155 MSGIASARLAEERKAWRKDHPFGFVARPMKNPD 253
MS + RL EERK WR+DHPFGF A+P K+ D
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSD 33
Score = 39.1 bits (87), Expect = 8e-04
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3
Query: 480 KANFVGYSRSLNEPNVKDPAQAEAYTIYCQNRLEYDK 590
K +G L++PN+ PAQ EAYT++ ++++EY+K
Sbjct: 110 KQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEK 146
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 86.2 bits (204), Expect = 5e-18
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+ TW+C I G GTP+EGGLY + F DYP PP KFE FHPNVY GTVC+S+
Sbjct: 34 DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISI 93
Query: 442 LDEEKD-----------WRPAITIKQILLGIQDL 510
L D W P ++++ILL + +
Sbjct: 94 LHAPGDDPNMYESSSERWSPVQSVEKILLSVMSM 127
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 79.0 bits (186), Expect = 8e-16
Identities = 37/88 (42%), Positives = 49/88 (55%)
Frame = +1
Query: 247 SRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 426
S S N+M W I G TP+E G +KL + F + YP+ PP KF +FHPNVY +G
Sbjct: 27 SPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGE 86
Query: 427 VCLSLLDEEKDWRPAITIKQILLGIQDL 510
+CL +L + W P + IL IQ L
Sbjct: 87 LCLDIL--QNRWSPTYDVAAILTSIQSL 112
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 510 LNEPNVKDPAQAEAYTIYCQNRLEY 584
LN+PN PA AEA ++ +N+ EY
Sbjct: 113 LNDPNNASPANAEAAQLHRENKKEY 137
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 76.6 bits (180), Expect = 4e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+L W+ I G +P+ GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W PA+TI ++LL I L
Sbjct: 89 LRDQ--WSPALTISKVLLSICSL 109
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 73.3 bits (172), Expect = 4e-14
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
NL ++ + G + + +EGG + L + D+YP PP +F ++HPNV G +CLS
Sbjct: 30 NLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLST 89
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L +KDW PA+ I+ +LL IQ L
Sbjct: 90 L--KKDWSPALQIRTVLLSIQAL 110
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 69.7 bits (163), Expect = 5e-13
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
NL+ W I G T +EG +K+ M F +YP SPP F P++HPNV SG +CL +
Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDI 116
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W ++ ILL +Q L
Sbjct: 117 LKDK--WSAVYNVQTILLSLQSL 137
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 68.5 bits (160), Expect = 1e-12
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ WE I G + T +EGG + + F DYP PPK KF ++HPNV+P+G VC+S+
Sbjct: 34 SIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISI 93
Query: 442 LDEEKD 459
L D
Sbjct: 94 LHPPGD 99
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 66.5 bits (155), Expect = 4e-12
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 468
G +GTP+EGG + + + DYP PPK F+ ++HPNV +G +CL +L ++ W P
Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSP 99
Query: 469 AITIKQILLGIQDL 510
T+K L+ +Q L
Sbjct: 100 VYTMKSALISLQSL 113
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 66.1 bits (154), Expect = 6e-12
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 310 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQI 489
++GG +K R+ D+YP PPK K ++HPN+ G VCL++L +DW P + + I
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL--RQDWNPVLNLNSI 122
Query: 490 LLGIQDLSMS 519
L+G+Q L +S
Sbjct: 123 LVGLQFLFLS 132
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 59.7 bits (138), Expect = 5e-10
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
NL W C G + + GG + + F DYP PP +F ++HPN G VCL++
Sbjct: 35 NLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAI 94
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L +++ ++P+I ++ +L I L
Sbjct: 95 L-KQQVFKPSIKLRSVLEQILQL 116
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 59.3 bits (137), Expect = 7e-10
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 LNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 435
+++ W+ I G TP+EGG + L + + YP SPP F+ + HPN+ + +G VC+
Sbjct: 32 VDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCM 91
Query: 436 SLLDEEKDWRPAITIKQILLGIQDL 510
+L + W PA +++ L I L
Sbjct: 92 DIL--KTHWSPAWSLQSACLAIISL 114
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N++ W I G TP+EGG Y +IF DYP PP + P + +CLS
Sbjct: 33 NILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF 90
Query: 442 LD-EEKDWRPAITIKQILLGI 501
D K W P+ + IL+G+
Sbjct: 91 SDFHPKSWNPSWMVSTILVGL 111
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 49.6 bits (113), Expect = 5e-07
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 238 YEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP 417
YE + + N+ + G TP+ GG++K+ + +YP P F +FHPN+
Sbjct: 20 YEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDE 79
Query: 418 -SGTVCLSLLDEEKDWRP 468
SG+VCL ++++ W P
Sbjct: 80 LSGSVCLDVINQ--TWSP 95
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.038
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 LNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 435
+ L W I G + E +Y L++ +YP +PP F + P V +G V
Sbjct: 36 ITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNP 95
Query: 436 SLLDEEKDWRPAITIKQILLGIQDLSMSLT*KIQRKL 546
+D + W+ +++ +LL DL + RKL
Sbjct: 96 HKIDCLRHWKREYSMETVLL---DLKKEMASSSNRKL 129
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -2
Query: 213 WSLRQAFRSSAKRALAIPDIFYKNNSIYEPSFNQGL 106
W LR+ +S++ + ++F K NSIY +F++ L
Sbjct: 71 WQLREQEQSNSHISRNENELFSKENSIYNGNFSENL 106
>SPBC1861.02 |abp2||ARS binding protein Abp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 355 NHL*RSYVVYTAHLPMESPFYQVSHIPKSLNSMNIWILHRPRDKTKGMVLTPSFPFFS*T 176
N + RS + A LPME+ +SH ++++ + P +T + TP+F F S T
Sbjct: 370 NTMLRSAFSHVARLPMETVSQLLSHYTETISQ------YLPPSETSPIPKTPNFKFISST 423
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 383 NLHFGGLDG*SSLKIIRSLYSPPSHGVPFLPGIAHSQV 270
N F G+ L + S SP HG P +PG+ H+ +
Sbjct: 442 NPQFSGVLNLPGLGTMPSFPSPYQHGQPQIPGMLHASL 479
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 259 LNLMTWECAIPGKKGTPWEGGLYK 330
L+ TW C++ G+ G +G L+K
Sbjct: 138 LDDQTWNCSVYGRNGIKVDGKLFK 161
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 7.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 220 WFCREAYEESRCSLNLMTW 276
W C E Y++ CSL+ +W
Sbjct: 15 WICYEEYDKKLCSLSNDSW 33
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,474,793
Number of Sequences: 5004
Number of extensions: 75179
Number of successful extensions: 189
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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