BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40199
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223529-1|BAD97249.1| 215|Homo sapiens T-complex 10A-2 variant... 31 3.6
AK058078-1|BAB71653.1| 215|Homo sapiens protein ( Homo sapiens ... 31 3.6
BC033855-1|AAH33855.1| 215|Homo sapiens t-complex 10 (mouse)-li... 31 4.8
AF115967-1|AAM18531.1| 215|Homo sapiens T-complex protein 10A-2... 31 4.8
Z93241-1|CAI19834.1| 314|Homo sapiens protein ( Human DNA seque... 30 8.3
Z46595-1|CAA86570.1| 388|Homo sapiens incomplete interleukin-11... 30 8.3
Z38102-1|CAA86224.1| 422|Homo sapiens interleukin-11 receptor p... 30 8.3
U32324-1|AAB36492.1| 422|Homo sapiens interleukin-11 receptor a... 30 8.3
U32323-1|AAB36491.1| 422|Homo sapiens interleukin-11 receptor a... 30 8.3
CR456455-1|CAG30341.1| 134|Homo sapiens dJ222E13.1 protein. 30 8.3
BT009864-1|AAP88866.1| 422|Homo sapiens interleukin 11 receptor... 30 8.3
BC127636-1|AAI27637.1| 314|Homo sapiens SERHL protein protein. 30 8.3
BC127635-1|AAI27636.1| 314|Homo sapiens SERHL protein protein. 30 8.3
BC119651-1|AAI19652.1| 314|Homo sapiens serine hydrolase-like 2... 30 8.3
BC119650-1|AAI19651.1| 314|Homo sapiens serine hydrolase-like 2... 30 8.3
BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein. 30 8.3
BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein. 30 8.3
BC003110-1|AAH03110.1| 422|Homo sapiens interleukin 11 receptor... 30 8.3
AY532110-1|AAS00093.1| 422|Homo sapiens interleukin 11 receptor... 30 8.3
AL590120-1|CAC34873.1| 314|Homo sapiens hypothetical protein pr... 30 8.3
AL590118-1|CAC34871.1| 250|Homo sapiens hypothetical protein pr... 30 8.3
AL589866-1|CAC34477.1| 134|Homo sapiens hypothetical protein pr... 30 8.3
AL450314-1|CAC16804.1| 314|Homo sapiens hypothetical protein pr... 30 8.3
AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein. 30 8.3
AL162231-3|CAH69858.1| 422|Homo sapiens interleukin 11 receptor... 30 8.3
AL162231-2|CAH69857.1| 390|Homo sapiens interleukin 11 receptor... 30 8.3
AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein. 30 8.3
>AK223529-1|BAD97249.1| 215|Homo sapiens T-complex 10A-2 variant
protein.
Length = 215
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 RSLSEEQAEVILARSLNPVAG-DKFELSWQPSMKKISNVSVSEETLYTTL-TANSPPTLV 181
R+L ++ + + +P AG + L+ +P+ KIS +S EET+ N TL+
Sbjct: 94 RALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGRKNQSATLL 153
Query: 182 IAASESNTVGPAKSFALNI 238
S SN P K +L I
Sbjct: 154 GQRSSSNNSAPPKPMSLKI 172
>AK058078-1|BAB71653.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ25349 fis, clone TST01443. ).
Length = 215
Score = 31.5 bits (68), Expect = 3.6
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 RSLSEEQAEVILARSLNPVAG-DKFELSWQPSMKKISNVSVSEETLYTTL-TANSPPTLV 181
R+L ++ + + +P AG + L+ +P+ KIS +S EET+ N TL+
Sbjct: 94 RALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGRKNQSATLL 153
Query: 182 IAASESNTVGPAKSFALNI 238
S SN P K +L I
Sbjct: 154 GQRSSSNNSAPPKPMSLKI 172
>BC033855-1|AAH33855.1| 215|Homo sapiens t-complex 10 (mouse)-like
protein.
Length = 215
Score = 31.1 bits (67), Expect = 4.8
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 RSLSEEQAEVILARSLNPVAG-DKFELSWQPSMKKISNVSVSEETLYTTL-TANSPPTLV 181
R+L ++ + + +P AG + L+ +P+ KIS +S EET+ N TL+
Sbjct: 94 RALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGHKNQSATLL 153
Query: 182 IAASESNTVGPAKSFALNI 238
S SN P K +L I
Sbjct: 154 GQRSSSNNSAPPKPMSLKI 172
>AF115967-1|AAM18531.1| 215|Homo sapiens T-complex protein 10A-2
protein.
Length = 215
Score = 31.1 bits (67), Expect = 4.8
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 RSLSEEQAEVILARSLNPVAG-DKFELSWQPSMKKISNVSVSEETLYTTL-TANSPPTLV 181
R+L ++ + + +P AG + L+ +P+ KIS +S EET+ N TL+
Sbjct: 94 RALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGHKNQSATLL 153
Query: 182 IAASESNTVGPAKSFALNI 238
S SN P K +L I
Sbjct: 154 GQRSSSNNSAPPKPMSLKI 172
>Z93241-1|CAI19834.1| 314|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>Z46595-1|CAA86570.1| 388|Homo sapiens incomplete interleukin-11
receptor isoform protein.
Length = 388
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 168 CPQDPLGAARCVVHGAEFWSQYR 190
>Z38102-1|CAA86224.1| 422|Homo sapiens interleukin-11 receptor
protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>U32324-1|AAB36492.1| 422|Homo sapiens interleukin-11 receptor
alpha chain protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>U32323-1|AAB36491.1| 422|Homo sapiens interleukin-11 receptor
alpha chain protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>CR456455-1|CAG30341.1| 134|Homo sapiens dJ222E13.1 protein.
Length = 134
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 97 FQFVEVPGNHCVHMSEPQHVASIISSFL 124
>BT009864-1|AAP88866.1| 422|Homo sapiens interleukin 11 receptor,
alpha protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>BC127636-1|AAI27637.1| 314|Homo sapiens SERHL protein protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>BC127635-1|AAI27636.1| 314|Homo sapiens SERHL protein protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>BC119651-1|AAI19652.1| 314|Homo sapiens serine hydrolase-like 2
protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>BC119650-1|AAI19651.1| 314|Homo sapiens serine hydrolase-like 2
protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 119 VSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFALNILEKCQIFYLISML*PYPEAM 298
V E L T+ + P V+ A E+ +LE Y++S L PY E
Sbjct: 15 VDQEETVLEGTMDQDEEPHPVLEAEETRHNRSMSELPEEVLE-----YILSFLSPYQEHK 69
Query: 299 TYTLPCPKWW 328
T L C +W+
Sbjct: 70 TAALVCKQWY 79
>BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein.
Length = 716
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 119 VSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFALNILEKCQIFYLISML*PYPEAM 298
V E L T+ + P V+ A E+ +LE Y++S L PY E
Sbjct: 15 VDQEETVLEGTMDQDEEPHPVLEAEETRHNRSMSELPEEVLE-----YILSFLSPYQEHK 69
Query: 299 TYTLPCPKWW 328
T L C +W+
Sbjct: 70 TAALVCKQWY 79
>BC003110-1|AAH03110.1| 422|Homo sapiens interleukin 11 receptor,
alpha protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>AY532110-1|AAS00093.1| 422|Homo sapiens interleukin 11 receptor,
alpha protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>AL590120-1|CAC34873.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>AL590118-1|CAC34871.1| 250|Homo sapiens hypothetical protein
protein.
Length = 250
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 213 FQFVEVPGNHCVHMSEPQHVASIISSFL 240
>AL589866-1|CAC34477.1| 134|Homo sapiens hypothetical protein
protein.
Length = 134
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 97 FQFVEVPGNHCVHMSEPQHVASIISSFL 124
>AL450314-1|CAC16804.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 FYVVTIPGGHDVHITMPEVVAEYIVKFL 351
F V +PG H VH++ P+ VA I FL
Sbjct: 277 FQFVEVPGNHCVHMSEPQHVASIISSFL 304
>AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 119 VSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFALNILEKCQIFYLISML*PYPEAM 298
V E L T+ + P V+ A E+ +LE Y++S L PY E
Sbjct: 15 VDQEETVLEGTMDQDEEPHPVLEAEETRHNRSMSELPEEVLE-----YILSFLSPYQEHK 69
Query: 299 TYTLPCPKWW 328
T L C +W+
Sbjct: 70 TAALVCKQWY 79
>AL162231-3|CAH69858.1| 422|Homo sapiens interleukin 11 receptor,
alpha protein.
Length = 422
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>AL162231-2|CAH69857.1| 390|Homo sapiens interleukin 11 receptor,
alpha protein.
Length = 390
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 337 CIQPPLRAW*CVRHGLRVWSQHR 269
C Q PL A CV HG WSQ+R
Sbjct: 170 CPQDPLGAARCVVHGAEFWSQYR 192
>AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 30.3 bits (65), Expect = 8.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 119 VSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFALNILEKCQIFYLISML*PYPEAM 298
V E L T+ + P V+ A E+ +LE Y++S L PY E
Sbjct: 15 VDQEETVLEGTMDQDEEPHPVLEAEETRHNRSMSELPEEVLE-----YILSFLSPYQEHK 69
Query: 299 TYTLPCPKWW 328
T L C +W+
Sbjct: 70 TAALVCKQWY 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,997,331
Number of Sequences: 237096
Number of extensions: 2305802
Number of successful extensions: 7836
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7836
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -