Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40199
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p4...    28   6.7  
Z70311-10|CAA94377.3|  602|Caenorhabditis elegans Hypothetical p...    28   8.8  
U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate recep...    28   8.8  
U58727-2|AAB00582.2|  462|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AF318609-1|AAK01097.1|  425|Caenorhabditis elegans ionotropic gl...    28   8.8  

>U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical
           protein F41H10.4 protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 19/82 (23%), Positives = 34/82 (41%)
 Frame = +2

Query: 2   RNRSLSEEQAEVILARSLNPVAGDKFELSWQPSMKKISNVSVSEETLYTTLTANSPPTLV 181
           R  S  +++AE+   R        +F L      +++  +S   ETL   +++ S   L 
Sbjct: 62  RASSSKKDEAEIESLRRKLETQEQEFRLQQSTLFEELKTISTQNETLKNQMSSYSDHPLE 121

Query: 182 IAASESNTVGPAKSFALNILEK 247
             A E  TV   K    N+ ++
Sbjct: 122 KEAEERQTVEQLKEAIKNLTDE 143


>Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical
           protein T23F6.5 protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 5   NRSLSEEQAEVILARSLNPVAG-----DKFELSWQPSMKKISNVSVSEETLYTTLTANSP 169
           N  + E     I+ R  N  AG     D   +++QP  KK+ N+S   +T+++T T+ +P
Sbjct: 207 NEIIPETNYFQIMLRFSNVTAGEMILLDDLTINYQPCQKKVKNLS---QTIHSTNTSTAP 263


>AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform b protein.
          Length = 516

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 676 LNKLFRFRETGNLLLDFSTNLMG 744
           LN+ F F+ TGN++LDF    +G
Sbjct: 465 LNEFFSFQITGNMILDFDFESVG 487


>Z70311-10|CAA94377.3|  602|Caenorhabditis elegans Hypothetical
           protein T25B9.6 protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -2

Query: 764 VYIYNNHPIKLVEKSNNKLPVSRKRNSLLRKLES 663
           VYI NN+ ++++  +   +   RK  S++RK+E+
Sbjct: 237 VYITNNNTLEMILDNEKSVQKIRKNLSIIRKMEA 270


>U97007-1|AAB52291.1|  932|Caenorhabditis elegans Glutamate receptor
           family (ampa)protein 5 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 684 FVKEIRKFKWNLNSSINPGNVPHP 613
           FV  +  ++WNLN S    + PHP
Sbjct: 586 FVANVTPYEWNLNFSCCTAHEPHP 609


>U58727-2|AAB00582.2|  462|Caenorhabditis elegans Hypothetical
           protein D1005.2 protein.
          Length = 462

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 289 GGHDVHITMPEVVAEYIVKFLNYKRNKLWSMIKSKI*NLRTVRRI 423
           GG  +H+ MP+V AE +  F + K  K+++     + NL+ V+++
Sbjct: 261 GGRMMHLEMPQVPAENLPDFCSTKVFKIFNTNNIYV-NLKAVKKL 304


>U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical
           protein C09B9.7 protein.
          Length = 913

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 151 SGVQSFFRDGNIRYFLHARLP 89
           +G+Q+ F D NI+ F+H  LP
Sbjct: 435 AGIQTIFNDMNIKTFIHELLP 455


>AF318609-1|AAK01097.1|  425|Caenorhabditis elegans ionotropic
           glutamate receptor GLR-5 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 684 FVKEIRKFKWNLNSSINPGNVPHP 613
           FV  +  ++WNLN S    + PHP
Sbjct: 146 FVANVTPYEWNLNFSCCTAHEPHP 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,173
Number of Sequences: 27780
Number of extensions: 374876
Number of successful extensions: 935
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)