Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40199
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    28   0.11 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.81 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   7.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 614 GCGTFPGLMELFKFH-LNFLISLTNYFAFGKLVIYY 718
           G   + G+ +LF F  LN  I+  NY AF  L  YY
Sbjct: 109 GSENYTGISDLFVFDDLNDYINRLNYSAFVNLTAYY 144


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +2

Query: 80  ELSWQPSMKKISNVSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFA 229
           E++W+   K++SN    +   Y T+  +    L I+++ +N  G  K  A
Sbjct: 424 EITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGGLYKCIA 473


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 629 PGLMELFKFHLNFLISLTNYF 691
           PG ++    H NF+ SL NY+
Sbjct: 570 PGNLKWLDIHGNFIESLGNYY 590


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 740 WDGYYIYKPFLLQSLY 787
           WD YYIY   + +  Y
Sbjct: 172 WDYYYIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 740 WDGYYIYKPFLLQSLY 787
           WD YYIY   + +  Y
Sbjct: 187 WDYYYIYHTLVAEQSY 202


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 740 WDGYYIYKPFLLQSLY 787
           WD YYIY   + +  Y
Sbjct: 75  WDYYYIYHTLVAEQSY 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,529
Number of Sequences: 438
Number of extensions: 4886
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)