Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40199
         (792 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ...    33   0.16 
At5g58100.1 68418.m07270 expressed protein                             28   8.2  
At5g42620.1 68418.m05188 expressed protein                             28   8.2  
At5g10610.1 68418.m01228 cytochrome P450 family protein similar ...    28   8.2  
At4g01360.1 68417.m00176 expressed protein                             28   8.2  
At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to ...    28   8.2  

>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
           subunit ClpX, putative similar to CLP protease
           regulatory subunit CLPX GI:2674203 from [Arabidopsis
           thaliana]; non-consensus splice donor GC at exon 4;
           non-consensus splice donor AA at exon 7
          Length = 606

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 98  SMKKISNVSVSEETLYTTLTANSPPTLVIAASESNTVGPAKSFALNILEKC 250
           S K I++ S+   +    L+ +SPP + +    SNT+ P+ SF+  I + C
Sbjct: 12  SRKTITSSSLLSRSFRFLLSVDSPPHIPLLRPSSNTLIPSSSFSRRIWDSC 62


>At5g58100.1 68418.m07270 expressed protein 
          Length = 945

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 238 NIQSEALSWPDRVRFRCCYH*SRGTVRSQSGVQSFFRDGNIRYFL 104
           N++ ++  W + V FR  +     +V S SGV ++ + GNI  +L
Sbjct: 49  NLRDKSRFWSESV-FRTDFDDLESSVHSNSGVLNYTKSGNIASYL 92


>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 472 VCSIKL-STLNQCPLSCQFDGLFVNSK 395
           +CS  + S L QCP SC F+G  V+ K
Sbjct: 591 LCSTSVVSVLGQCPNSCNFNGDCVDGK 617


>At5g10610.1 68418.m01228 cytochrome P450 family protein similar to
           Cytochrome P450 91A1 (SP:Q9FG65)  [Arabidopsis
           thaliana]; similar to cytochrome P450, Helianthus
           tuberosus, EMBL:HTCYP81L
          Length = 500

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 669 RKFKWNLNSSINPGNVPHPLI 607
           +KF W+LNS + P   P P+I
Sbjct: 22  KKFLWSLNSKLPPSPTPLPII 42


>At4g01360.1 68417.m00176 expressed protein 
          Length = 348

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +2

Query: 26  QAEVILARSLNPVAGDKFELSWQPSMKKISNVSVSEETLYTTLTANSPPTLVIAASESNT 205
           QA + L  ++NP   + F       +K +  V    + LYT +   S P L++   E + 
Sbjct: 232 QAFMELQNTINPEIKNTFLSDGFTVIKDLEAVETGVKKLYTAVQEGSVPILLVEPLEKSV 291

Query: 206 VGPAKSFAL 232
           +  ++ F L
Sbjct: 292 IELSERFEL 300


>At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to
           epoxide hydrolase [Glycine max] GI:2764806; contains
           Pfam profile PF00561: hydrolase, alpha/beta fold family
          Length = 323

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 256 ILPNFYVVTIPGGHD-VHITMPEVVAEYIVKFLN 354
           ++PN  +V I GGH  +     E V++ I+ FLN
Sbjct: 284 VVPNLEIVVIEGGHHFIQQEKSEQVSQEILSFLN 317


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,848,046
Number of Sequences: 28952
Number of extensions: 341508
Number of successful extensions: 778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)